RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-217ENST00000552801 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-217ENST00000552801 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 CDHR2Q9BYE9 1310 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
TMEM116-217ENST00000552801 HOXB7P09629 217 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 KIAA2012Q0VF49 1180 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 EYA3Q99504 573 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-217ENST00000552801 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
TMEM116-217ENST00000552801 LAMB2P55268 1798 aa11.26□□□□□ -0.61
TMEM116-217ENST00000552801 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
TMEM116-217ENST00000552801 TRAF5O00463 557 aa11.25□□□□□ -0.61
TMEM116-217ENST00000552801 CHL1O00533 1208 aa11.25□□□□□ -0.61
TMEM116-217ENST00000552801 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
TMEM116-217ENST00000552801 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-217ENST00000552801 CYP4F22Q6NT55 531 aa11.25□□□□□ -0.61
TMEM116-217ENST00000552801 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
TMEM116-217ENST00000552801 COL4A5P29400 1685 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 PCNTO95613 3336 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 CDC37L1Q7L3B6 337 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
TMEM116-217ENST00000552801 FAM89AQ96GI7 184 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
TMEM116-217ENST00000552801 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
TMEM116-217ENST00000552801 DDX58O95786 925 aaKnown RBP11.23□□□□□ -0.61
TMEM116-217ENST00000552801 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
TMEM116-217ENST00000552801 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-217ENST00000552801 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
TMEM116-217ENST00000552801 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
TMEM116-217ENST00000552801 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
TMEM116-217ENST00000552801 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
TMEM116-217ENST00000552801 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-217ENST00000552801 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
TMEM116-217ENST00000552801 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
TMEM116-217ENST00000552801 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-217ENST00000552801 CA12O43570 354 aa11.22□□□□□ -0.61
TMEM116-217ENST00000552801 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-217ENST00000552801 MAP2K2P36507 400 aa11.22□□□□□ -0.61
TMEM116-217ENST00000552801 FMR1Q06787 632 aaKnown RBP eCLIP11.22□□□□□ -0.61
TMEM116-217ENST00000552801 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
TMEM116-217ENST00000552801 DCPSQ96C86 337 aaKnown RBP11.22□□□□□ -0.61
TMEM116-217ENST00000552801 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
TMEM116-217ENST00000552801 TAF1P21675 1872 aa11.22□□□□□ -0.61
TMEM116-217ENST00000552801 GNAI1P63096 354 aa11.21□□□□□ -0.61
TMEM116-217ENST00000552801 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
TMEM116-217ENST00000552801 CST9Q5W186 159 aa11.21□□□□□ -0.61
TMEM116-217ENST00000552801 SLC51AQ86UW1 340 aa11.21□□□□□ -0.61
TMEM116-217ENST00000552801 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
TMEM116-217ENST00000552801 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
TMEM116-217ENST00000552801 CCDC85CA6NKD9 419 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 ECE2O60344 883 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 AOC2O75106 756 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 SF3B3Q15393 1217 aaKnown RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 DPF2Q92785 391 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 MYD88Q99836 296 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 ISCA1Q9BUE6 129 aa11.2□□□□□ -0.62
TMEM116-217ENST00000552801 DDX60Q8IY21 1712 aaKnown RBP11.2□□□□□ -0.62
TMEM116-217ENST00000552801 PSMD14O00487 310 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 UFL1O94874 794 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 HUNKP57058 714 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 GPSM2P81274 684 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 TBC1D10BQ4KMP7 808 aaPredicted RBP11.19□□□□□ -0.62
TMEM116-217ENST00000552801 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 ZBTB38Q8NAP3 1195 aaPredicted RBP11.19□□□□□ -0.62
TMEM116-217ENST00000552801 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 GGA1Q9UJY5 639 aa11.19□□□□□ -0.62
TMEM116-217ENST00000552801 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 NOGQ13253 232 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 CCDC30Q5VVM6 783 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
TMEM116-217ENST00000552801 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms