RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 PATL2C9JE40 543 aaKnown RBP5.66□□□□□ -1.5
NPAS3-212ENST00000552696 J3QW42 95 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 GNB5O14775 395 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 ELMSAN1Q6PJG2 1045 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 SNX29Q8TEQ0 813 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 SUV39H2Q9H5I1 410 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 KANSL3Q9P2N6 904 aa5.66□□□□□ -1.5
NPAS3-212ENST00000552696 FOXD3Q9UJU5 478 aaPredicted RBP5.66□□□□□ -1.5
NPAS3-212ENST00000552696 LOC102724428A0A0B4J2F2 783 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 LILRB5O75023 590 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 TNFRSF21O75509 655 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 RGS9O75916 674 aaPredicted RBP5.65□□□□□ -1.5
NPAS3-212ENST00000552696 GHRHP01286 108 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 SIK1P57059 783 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 HYAL2Q12891 473 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 COL9A3Q14050 684 aaPredicted RBP5.65□□□□□ -1.5
NPAS3-212ENST00000552696 KCTD17Q8N5Z5 321 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 TRIM11Q96F44 468 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 FAM129BQ96TA1 746 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 CHRDQ9H2X0 955 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 PRDM6Q9NQX0 595 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 FRRS1LQ9P0K9 344 aa5.65□□□□□ -1.5
NPAS3-212ENST00000552696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.65□□□□□ -1.5
NPAS3-212ENST00000552696 PIK3R2O00459 728 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 GPR182O15218 404 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 PHACTR2O75167 634 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 KIF4AO95239 1232 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 NID1P14543 1247 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 CES1P23141 567 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 GSK3AP49840 483 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 KCNMA1Q12791 1236 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 PLD4Q96BZ4 506 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 SMG9Q9H0W8 520 aaKnown RBP5.64□□□□□ -1.51
NPAS3-212ENST00000552696 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
NPAS3-212ENST00000552696 EREGO14944 169 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 ACPPP15309 386 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 COL8A1P27658 744 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 AFF1P51825 1210 aaKnown RBP5.63□□□□□ -1.51
NPAS3-212ENST00000552696 ATP11AP98196 1134 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 PDE3BQ13370 1112 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 TMC1Q8TDI8 760 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 RBCK1Q9BYM8 510 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 RBSNQ9H1K0 784 aa5.63□□□□□ -1.51
NPAS3-212ENST00000552696 IGHA2P01877 340 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 MAPK1P28482 360 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 RASSF7Q02833 373 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 ORC1Q13415 861 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 TMC7Q7Z402 723 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 HOMEZQ8IX15 550 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 CITED4Q96RK1 184 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 PLVAPQ9BX97 442 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 RASSF4Q9H2L5 321 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 NOP53Q9NZM5 478 aaKnown RBP5.62□□□□□ -1.51
NPAS3-212ENST00000552696 SALL4Q9UJQ4 1053 aa5.62□□□□□ -1.51
NPAS3-212ENST00000552696 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
NPAS3-212ENST00000552696 GRIK5Q16478 980 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 SND1Q7KZF4 910 aaKnown RBP eCLIP5.61□□□□□ -1.51
NPAS3-212ENST00000552696 CEP120Q8N960 986 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 TTC9Q92623 222 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 PMEPA1Q969W9 287 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 TRIM33Q9UPN9 1127 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 AMOTL2Q9Y2J4 779 aa5.61□□□□□ -1.51
NPAS3-212ENST00000552696 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 USPL1Q5W0Q7 1092 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 CEP135Q66GS9 1140 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 GDF6Q6KF10 455 aaPredicted RBP5.6□□□□□ -1.51
NPAS3-212ENST00000552696 WFDC8Q8IUA0 241 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 DCAF5Q96JK2 942 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 DMRTB1Q96MA1 342 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 HHIPQ96QV1 700 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 NIF3L1Q9GZT8 377 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 ZFYVE28Q9HCC9 887 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 LATS2Q9NRM7 1088 aa5.6□□□□□ -1.51
NPAS3-212ENST00000552696 SPDYE3A6NKU9 549 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 TRPA1O75762 1119 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 SMNDC1O75940 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
NPAS3-212ENST00000552696 GDF11O95390 407 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 TRAPPC3LQ5T215 181 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 MSL1Q68DK7 614 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 DMRTC2Q8IXT2 367 aaPredicted RBP5.59□□□□□ -1.51
NPAS3-212ENST00000552696 TMEM151AQ8N4L1 468 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 ALKBH8Q96BT7 664 aaKnown RBP5.59□□□□□ -1.51
NPAS3-212ENST00000552696 ZKSCAN3Q9BRR0 538 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 LACRTQ9GZZ8 138 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 DZANK1Q9NVP4 752 aa5.59□□□□□ -1.51
NPAS3-212ENST00000552696 A0A0A0MRY4 1105 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 EIF1AYO14602 144 aaKnown RBP5.58□□□□□ -1.52
NPAS3-212ENST00000552696 NEFLP07196 543 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 EDN3P14138 238 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 BAG6P46379 1132 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 PRRT3Q5FWE3 981 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
NPAS3-212ENST00000552696 ADAMTSL4Q6UY14 1074 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 OSMRQ99650 979 aa5.58□□□□□ -1.52
NPAS3-212ENST00000552696 KRBA1A5PL33 1030 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms