RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 VIL1P09327 827 aaKnown RBP22.05■■□□□ 1.12
CACNB3-222ENST00000552465 HDGFL1Q5TGJ6 251 aa22.05■■□□□ 1.12
CACNB3-222ENST00000552465 IRS4O14654 1257 aaPredicted RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 TRIM28Q13263 835 aaKnown RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
CACNB3-222ENST00000552465 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 SULF1Q8IWU6 871 aa22.04■■□□□ 1.12
CACNB3-222ENST00000552465 ZC3H12CQ9C0D7 883 aaKnown RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 DBF4Q9UBU7 674 aaPredicted RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
CACNB3-222ENST00000552465 SLC10A3P09131 477 aa22.03■■□□□ 1.12
CACNB3-222ENST00000552465 HOXB7P09629 217 aa22.03■■□□□ 1.12
CACNB3-222ENST00000552465 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
CACNB3-222ENST00000552465 GGA3Q9NZ52 723 aa22.03■■□□□ 1.12
CACNB3-222ENST00000552465 PCDH10Q9P2E7 1040 aa22.03■■□□□ 1.12
CACNB3-222ENST00000552465 PODXL2Q9NZ53 605 aa22.02■■□□□ 1.12
CACNB3-222ENST00000552465 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.12
CACNB3-222ENST00000552465 DDX60Q8IY21 1712 aaKnown RBP22.02■■□□□ 1.12
CACNB3-222ENST00000552465 ASTN2O75129 1339 aaPredicted RBP22.02■■□□□ 1.12
CACNB3-222ENST00000552465 COL4A1P02462 1669 aa22.01■■□□□ 1.11
CACNB3-222ENST00000552465 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
CACNB3-222ENST00000552465 CDCA5Q96FF9 252 aa22.01■■□□□ 1.11
CACNB3-222ENST00000552465 HYPKQ9NX55 129 aa22.01■■□□□ 1.11
CACNB3-222ENST00000552465 G3V3G9 751 aa22■■□□□ 1.11
CACNB3-222ENST00000552465 SOX10P56693 466 aa22■■□□□ 1.11
CACNB3-222ENST00000552465 ZNF280AP59817 542 aaPredicted RBP22■■□□□ 1.11
CACNB3-222ENST00000552465 RALBP1Q15311 655 aa22■■□□□ 1.11
CACNB3-222ENST00000552465 DCAF8Q5TAQ9 597 aa22■■□□□ 1.11
CACNB3-222ENST00000552465 SEC31BQ9NQW1 1179 aa22■■□□□ 1.11
CACNB3-222ENST00000552465 UFL1O94874 794 aa21.99■■□□□ 1.11
CACNB3-222ENST00000552465 SCARF1Q14162 830 aa21.99■■□□□ 1.11
CACNB3-222ENST00000552465 REM2Q8IYK8 340 aaPredicted RBP21.99■■□□□ 1.11
CACNB3-222ENST00000552465 ANKIB1Q9P2G1 1089 aa21.99■■□□□ 1.11
CACNB3-222ENST00000552465 ANGEL2Q5VTE6 544 aaKnown RBP21.98■■□□□ 1.11
CACNB3-222ENST00000552465 ZBTB38Q8NAP3 1195 aaPredicted RBP21.98■■□□□ 1.11
CACNB3-222ENST00000552465 AGBL3Q8NEM8 1001 aa21.98■■□□□ 1.11
CACNB3-222ENST00000552465 GGA1Q9UJY5 639 aa21.98■■□□□ 1.11
CACNB3-222ENST00000552465 POLR2AP24928 1970 aaKnown RBP21.98■■□□□ 1.11
CACNB3-222ENST00000552465 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
CACNB3-222ENST00000552465 RSBN1LQ6PCB5 846 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-222ENST00000552465 CTU1Q7Z7A3 348 aaKnown RBP21.97■■□□□ 1.11
CACNB3-222ENST00000552465 RASAL3Q86YV0 1011 aa21.97■■□□□ 1.11
CACNB3-222ENST00000552465 HSP90B1P14625 803 aaKnown RBP21.96■■□□□ 1.11
CACNB3-222ENST00000552465 FKBP1BP68106 108 aa21.96■■□□□ 1.11
CACNB3-222ENST00000552465 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
CACNB3-222ENST00000552465 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
CACNB3-222ENST00000552465 GMLQ99445 158 aa21.95■■□□□ 1.1
CACNB3-222ENST00000552465 ZNF609O15014 1411 aa21.95■■□□□ 1.1
CACNB3-222ENST00000552465 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
CACNB3-222ENST00000552465 GOLGA2Q08379 1002 aa21.93■■□□□ 1.1
CACNB3-222ENST00000552465 SCN9AQ15858 1988 aa21.93■■□□□ 1.1
CACNB3-222ENST00000552465 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
CACNB3-222ENST00000552465 MYOZ2Q9NPC6 264 aa21.93■■□□□ 1.1
CACNB3-222ENST00000552465 PITPNM2Q9BZ72 1349 aa21.92■■□□□ 1.1
CACNB3-222ENST00000552465 PHAXQ9H814 394 aaKnown RBP21.92■■□□□ 1.1
CACNB3-222ENST00000552465 MBIPQ9NS73 344 aa21.92■■□□□ 1.1
CACNB3-222ENST00000552465 PDE8AO60658 829 aa21.91■■□□□ 1.1
CACNB3-222ENST00000552465 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
CACNB3-222ENST00000552465 PODNQ7Z5L7 613 aa21.91■■□□□ 1.1
CACNB3-222ENST00000552465 CCDC191Q8NCU4 936 aa21.91■■□□□ 1.1
CACNB3-222ENST00000552465 MYD88Q99836 296 aa21.91■■□□□ 1.1
CACNB3-222ENST00000552465 XDHP47989 1333 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 USP17L3A6NCW0 530 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 USP17L4A6NCW7 530 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 MOB2Q70IA6 237 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 USP17L1Q7RTZ2 530 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 JARID2Q92833 1246 aaPredicted RBP21.9■■□□□ 1.1
CACNB3-222ENST00000552465 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
CACNB3-222ENST00000552465 HPS5Q9UPZ3 1129 aa21.9■■□□□ 1.1
CACNB3-222ENST00000552465 UBE2Q2LH0YL09 131 aa21.89■■□□□ 1.09
CACNB3-222ENST00000552465 ATP2B4P23634 1241 aa21.89■■□□□ 1.09
CACNB3-222ENST00000552465 PKN2Q16513 984 aaKnown RBP21.89■■□□□ 1.09
CACNB3-222ENST00000552465 ANKRD18AQ8IVF6 992 aa21.89■■□□□ 1.09
CACNB3-222ENST00000552465 SCAF8Q9UPN6 1271 aaKnown RBP21.89■■□□□ 1.09
CACNB3-222ENST00000552465 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
CACNB3-222ENST00000552465 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
CACNB3-222ENST00000552465 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
CACNB3-222ENST00000552465 PRAMEF18Q5VWM3 479 aa21.88■■□□□ 1.09
CACNB3-222ENST00000552465 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
CACNB3-222ENST00000552465 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
CACNB3-222ENST00000552465 TBC1D8O95759 1140 aa21.87■■□□□ 1.09
CACNB3-222ENST00000552465 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
CACNB3-222ENST00000552465 ZNF296Q8WUU4 475 aaPredicted RBP21.87■■□□□ 1.09
CACNB3-222ENST00000552465 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
CACNB3-222ENST00000552465 PAPPA2Q9BXP8 1791 aa21.87■■□□□ 1.09
CACNB3-222ENST00000552465 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
CACNB3-222ENST00000552465 TM4SF4P48230 202 aa21.86■■□□□ 1.09
CACNB3-222ENST00000552465 NBPF9Q3BBW0 867 aa21.86■■□□□ 1.09
CACNB3-222ENST00000552465 PRPF38BQ5VTL8 546 aaKnown RBP21.86■■□□□ 1.09
CACNB3-222ENST00000552465 METTL22Q9BUU2 404 aaPredicted RBP21.86■■□□□ 1.09
CACNB3-222ENST00000552465 ELL2O00472 640 aaPredicted RBP21.85■■□□□ 1.09
CACNB3-222ENST00000552465 PDE4DIPQ5VU43 2346 aa21.84■■□□□ 1.09
CACNB3-222ENST00000552465 TNRC18O15417 2968 aaPredicted RBP21.84■■□□□ 1.09
CACNB3-222ENST00000552465 TTLL12Q14166 644 aaPredicted RBP21.84■■□□□ 1.09
CACNB3-222ENST00000552465 MXD3Q9BW11 206 aa21.84■■□□□ 1.09
CACNB3-222ENST00000552465 NOM1Q5C9Z4 860 aaKnown RBP21.83■■□□□ 1.09
CACNB3-222ENST00000552465 DACT2Q5SW24 774 aa21.83■■□□□ 1.09
CACNB3-222ENST00000552465 OGFOD1Q8N543 542 aa21.83■■□□□ 1.09
CACNB3-222ENST00000552465 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
CACNB3-222ENST00000552465 IFT57Q9NWB7 429 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms