RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 C8orf86Q6ZUL3 223 aa5.96□□□□□ -1.46
USP44-208ENST00000552440 ANKMY2Q8IV38 441 aa5.96□□□□□ -1.46
USP44-208ENST00000552440 HIRIP3Q9BW71 556 aaPredicted RBP5.96□□□□□ -1.46
USP44-208ENST00000552440 NFKB1P19838 968 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 SERPINB4P48594 390 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
USP44-208ENST00000552440 DPYDQ12882 1025 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 NOL8Q76FK4 1167 aaKnown RBP5.95□□□□□ -1.46
USP44-208ENST00000552440 FAM35AQ86V20 835 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 ZFP64Q9NPA5 681 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 USP21Q9UK80 565 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 C11orf91Q3C1V1 193 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 ARTNQ5T4W7 220 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 NBPF11Q86T75 865 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 FMR1NBQ8N0W7 255 aaPredicted RBP5.95□□□□□ -1.46
USP44-208ENST00000552440 CACTIN-AS1Q8N1I8 211 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 NUDT8Q8WV74 236 aa5.95□□□□□ -1.46
USP44-208ENST00000552440 DMGDHQ9UI17 866 aaKnown RBP5.95□□□□□ -1.46
USP44-208ENST00000552440 SELPP16109 830 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 ITGB7P26010 798 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 INPP5BP32019 993 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 ZC3H6P61129 1189 aaKnown RBP5.94□□□□□ -1.46
USP44-208ENST00000552440 SWI5Q1ZZU3 235 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 PRSS36Q5K4E3 855 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 MSL1Q68DK7 614 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 ELMSAN1Q6PJG2 1045 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 FBXO11Q86XK2 927 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 WFDC8Q8IUA0 241 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 TRPM4Q8TD43 1214 aa5.94□□□□□ -1.46
USP44-208ENST00000552440 SRA1Q9HD15 236 aaKnown RBP5.94□□□□□ -1.46
USP44-208ENST00000552440 SCNN1AP37088 669 aa5.93□□□□□ -1.46
USP44-208ENST00000552440 IDH3AP50213 366 aa5.93□□□□□ -1.46
USP44-208ENST00000552440 TMED8Q6PL24 325 aaPredicted RBP5.93□□□□□ -1.46
USP44-208ENST00000552440 IGF2-ASQ6U949 168 aa5.93□□□□□ -1.46
USP44-208ENST00000552440 DMRTC2Q8IXT2 367 aaPredicted RBP5.93□□□□□ -1.46
USP44-208ENST00000552440 MYO19Q96H55 970 aa5.93□□□□□ -1.46
USP44-208ENST00000552440 RBSNQ9H1K0 784 aa5.93□□□□□ -1.46
USP44-208ENST00000552440 NRLP54845 237 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 GPLD1P80108 840 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
USP44-208ENST00000552440 DHX32Q7L7V1 743 aaKnown RBP5.92□□□□□ -1.46
USP44-208ENST00000552440 BCL2L13Q9BXK5 485 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 PPP1R1BQ9UD71 204 aaPredicted RBP5.92□□□□□ -1.46
USP44-208ENST00000552440 MARCH6O60337 910 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 MICAL2O94851 1124 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 MAP4K3Q8IVH8 894 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 ZNF526Q8TF50 670 aaPredicted RBP5.92□□□□□ -1.46
USP44-208ENST00000552440 TP53INP1Q96A56 240 aa5.92□□□□□ -1.46
USP44-208ENST00000552440 EGFRP00533 1210 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 RARAP10276 462 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 WEE1P30291 646 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 LRP8Q14114 963 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 ILDR2Q71H61 639 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 MUC3BQ9H195 1237 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
USP44-208ENST00000552440 PLEKHD1A6NEE1 506 aa5.9□□□□□ -1.46
USP44-208ENST00000552440 CPB1P15086 417 aa5.9□□□□□ -1.46
USP44-208ENST00000552440 DGKZQ13574 1117 aa5.9□□□□□ -1.46
USP44-208ENST00000552440 PRDM16Q9HAZ2 1276 aa5.9□□□□□ -1.46
USP44-208ENST00000552440 BIN2Q9UBW5 565 aaPredicted RBP5.9□□□□□ -1.46
USP44-208ENST00000552440 BCS1LQ9Y276 419 aa5.9□□□□□ -1.46
USP44-208ENST00000552440 PSAPP07602 524 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 OCLNQ16625 522 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 GIMAP6Q6P9H5 292 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 NPAS4Q8IUM7 802 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 GIPC2Q8TF65 315 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 PSMG3-AS1Q96PY0 264 aa5.9□□□□□ -1.47
USP44-208ENST00000552440 TLR7Q9NYK1 1049 aaKnown RBP5.9□□□□□ -1.47
USP44-208ENST00000552440 LOC102724159A0A0B4J2E5 919 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 ANKRD33BA6NCL7 494 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 PLAURQ03405 335 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 PWP2Q15269 919 aaKnown RBP5.89□□□□□ -1.47
USP44-208ENST00000552440 WFDC12Q8WWY7 111 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 LPIN3Q9BQK8 851 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 KLK14Q9P0G3 267 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 EGFL7Q9UHF1 273 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 NAGPAQ9UK23 515 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 RIPOR2Q9Y4F9 1068 aa5.89□□□□□ -1.47
USP44-208ENST00000552440 PRMT3O60678 531 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 GHRHP01286 108 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 VAMP1P23763 118 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 SOX18P35713 384 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 PERM1Q5SV97 790 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 SSBP4Q9BWG4 385 aaPredicted RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 RTCBQ9Y3I0 505 aaKnown RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 SASH3O75995 380 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
USP44-208ENST00000552440 MRPL18Q9H0U6 180 aaKnown RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 QTRT2Q9H974 415 aaKnown RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 CXXC1Q9P0U4 656 aaPredicted RBP5.88□□□□□ -1.47
USP44-208ENST00000552440 XYLBO75191 536 aa5.87□□□□□ -1.47
USP44-208ENST00000552440 HOXD8P13378 290 aaPredicted RBP5.87□□□□□ -1.47
USP44-208ENST00000552440 EIF2AK2P19525 551 aaKnown RBP5.87□□□□□ -1.47
USP44-208ENST00000552440 ZNF662Q6ZS27 426 aa5.87□□□□□ -1.47
USP44-208ENST00000552440 KRT25Q7Z3Z0 450 aa5.87□□□□□ -1.47
USP44-208ENST00000552440 TMEM130Q8N3G9 435 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms