RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
HCFC2-206ENST00000552343 GLB1P16278 677 aa7.41□□□□□ -1.22
HCFC2-206ENST00000552343 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
HCFC2-206ENST00000552343 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
HCFC2-206ENST00000552343 PLD4Q96BZ4 506 aa7.41□□□□□ -1.22
HCFC2-206ENST00000552343 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
HCFC2-206ENST00000552343 LGR5O75473 907 aa7.4□□□□□ -1.22
HCFC2-206ENST00000552343 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
HCFC2-206ENST00000552343 SETDB1Q15047 1291 aa7.4□□□□□ -1.22
HCFC2-206ENST00000552343 IL22RA1Q8N6P7 574 aa7.4□□□□□ -1.22
HCFC2-206ENST00000552343 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
HCFC2-206ENST00000552343 DGKZQ13574 1117 aa7.39□□□□□ -1.23
HCFC2-206ENST00000552343 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
HCFC2-206ENST00000552343 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
HCFC2-206ENST00000552343 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
HCFC2-206ENST00000552343 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 MICAL2O94851 1124 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 SIK1P57059 783 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 FZD5Q13467 585 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
HCFC2-206ENST00000552343 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.38□□□□□ -1.23
HCFC2-206ENST00000552343 ZDHHC13Q8IUH4 622 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 USP20Q9Y2K6 914 aa7.38□□□□□ -1.23
HCFC2-206ENST00000552343 FAM196BA6NMK8 535 aa7.37□□□□□ -1.23
HCFC2-206ENST00000552343 SPINK2P20155 84 aa7.37□□□□□ -1.23
HCFC2-206ENST00000552343 IGFBP4P22692 258 aa7.37□□□□□ -1.23
HCFC2-206ENST00000552343 MAP4K3Q8IVH8 894 aa7.37□□□□□ -1.23
HCFC2-206ENST00000552343 OPLAHO14841 1288 aa7.36□□□□□ -1.23
HCFC2-206ENST00000552343 BRD1O95696 1058 aa7.36□□□□□ -1.23
HCFC2-206ENST00000552343 ARMC10Q8N2F6 343 aa7.36□□□□□ -1.23
HCFC2-206ENST00000552343 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
HCFC2-206ENST00000552343 QTRT2Q9H974 415 aaKnown RBP7.36□□□□□ -1.23
HCFC2-206ENST00000552343 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
HCFC2-206ENST00000552343 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
HCFC2-206ENST00000552343 EGFRP00533 1210 aa7.35□□□□□ -1.23
HCFC2-206ENST00000552343 GHRHP01286 108 aa7.35□□□□□ -1.23
HCFC2-206ENST00000552343 PSAPP07602 524 aa7.35□□□□□ -1.23
HCFC2-206ENST00000552343 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
HCFC2-206ENST00000552343 INTS5Q6P9B9 1019 aaKnown RBP7.35□□□□□ -1.23
HCFC2-206ENST00000552343 NSUN5Q96P11 429 aaKnown RBP7.35□□□□□ -1.23
HCFC2-206ENST00000552343 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
HCFC2-206ENST00000552343 MMP20O60882 483 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 XYLBO75191 536 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 KCNA1Q09470 495 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 NFIAQ12857 509 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 C11orf91Q3C1V1 193 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 AEBP1Q8IUX7 1158 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 GALNT11Q8NCW6 608 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
HCFC2-206ENST00000552343 USP17L15C9J2P7 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L13C9JLJ4 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L11C9JVI0 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L21D6R901 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L18D6R9N7 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L22D6RA61 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L17D6RBQ6 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L19D6RCP7 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L20D6RJB6 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 WISP1O95388 367 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 GRIK1P39086 918 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 USP17L24Q0WX57 530 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 DPYDQ12882 1025 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 CDCA8Q53HL2 280 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 KANK4Q5T7N3 995 aaPredicted RBP7.33□□□□□ -1.24
HCFC2-206ENST00000552343 DTX1Q86Y01 620 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
HCFC2-206ENST00000552343 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 RBSNQ9H1K0 784 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 C7orf69Q9H7B7 122 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 NOVA2Q9UNW9 492 aaKnown RBP7.33□□□□□ -1.24
HCFC2-206ENST00000552343 PPME1Q9Y570 386 aa7.33□□□□□ -1.24
HCFC2-206ENST00000552343 PRR19A6NJB7 356 aa7.32□□□□□ -1.24
HCFC2-206ENST00000552343 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
HCFC2-206ENST00000552343 TRIM42Q8IWZ5 723 aa7.32□□□□□ -1.24
HCFC2-206ENST00000552343 CEP41Q9BYV8 373 aa7.32□□□□□ -1.24
HCFC2-206ENST00000552343 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
HCFC2-206ENST00000552343 SOX18P35713 384 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 TRIM26Q12899 539 aaPredicted RBP7.31□□□□□ -1.24
HCFC2-206ENST00000552343 PTK7Q13308 1070 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
HCFC2-206ENST00000552343 RNF43Q68DV7 783 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 RGL4Q8IZJ4 473 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 UTP4Q969X6 686 aaKnown RBP7.31□□□□□ -1.24
HCFC2-206ENST00000552343 MYO19Q96H55 970 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 DBNDD2Q9BQY9 259 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 MTMR7Q9Y216 660 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
HCFC2-206ENST00000552343 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
HCFC2-206ENST00000552343 HMX2A2RU54 273 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 LINC01387J3KSC0 135 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 WNT11O96014 354 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 ANKMY2Q8IV38 441 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 CACTIN-AS1Q8N1I8 211 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 FAM46AQ96IP4 442 aaKnown RBP7.3□□□□□ -1.24
HCFC2-206ENST00000552343 KCNK4Q9NYG8 393 aa7.3□□□□□ -1.24
HCFC2-206ENST00000552343 ADGRE2Q9UHX3 823 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms