RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 CRISPLD1Q9H336 500 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 NRAPQ86VF7 1730 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 GPR25O00155 361 aa10.03□□□□□ -0.8
DEPDC4-210ENST00000551642 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
DEPDC4-210ENST00000551642 UBAP2LQ14157 1087 aaKnown RBP10.03□□□□□ -0.8
DEPDC4-210ENST00000551642 VPS72Q15906 364 aa10.03□□□□□ -0.8
DEPDC4-210ENST00000551642 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
DEPDC4-210ENST00000551642 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 TSPY4P0CV99 314 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 TSPY10P0CW01 314 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 TBC1D9Q6ZT07 1266 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
DEPDC4-210ENST00000551642 USP17L3A6NCW0 530 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 USP17L4A6NCW7 530 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 EFHC2Q5JST6 749 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 USP17L1Q7RTZ2 530 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 DEPDC4Q8N2C3 294 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 PHF24Q9UPV7 400 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 THSD7AQ9UPZ6 1657 aa10.01□□□□□ -0.81
DEPDC4-210ENST00000551642 PLA2G4AP47712 749 aa10□□□□□ -0.81
DEPDC4-210ENST00000551642 GLMNQ92990 594 aa10□□□□□ -0.81
DEPDC4-210ENST00000551642 ZNF358Q9NW07 568 aa10□□□□□ -0.81
DEPDC4-210ENST00000551642 SLC52A1Q9NWF4 448 aa10□□□□□ -0.81
DEPDC4-210ENST00000551642 NSFL1CQ9UNZ2 370 aaKnown RBP10□□□□□ -0.81
DEPDC4-210ENST00000551642 VPS8Q8N3P4 1428 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 PCNTO95613 3336 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 ZBTB7BO15156 539 aaPredicted RBP9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 CELA2BP08218 269 aaPredicted RBP9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 MX2P20592 715 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 KCNMA1Q12791 1236 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 LYPD4Q6UWN0 246 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 RUBCNLQ9H714 662 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 SCHIP1Q9P0W5 487 aaPredicted RBP9.99□□□□□ -0.81
DEPDC4-210ENST00000551642 ATP4AP20648 1035 aa9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 EPHA4P54764 986 aa9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 PSME1Q06323 249 aa9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 COL13A1Q5TAT6 717 aaPredicted RBP9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 NLRP8Q86W28 1048 aa9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
DEPDC4-210ENST00000551642 PRELPP51888 382 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 FOXK2Q01167 660 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 LARGE2Q8N3Y3 721 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 PDGFDQ9GZP0 370 aaPredicted RBP9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 METP08581 1390 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 PARD3Q8TEW0 1356 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 ERBINQ96RT1 1412 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 ADGRL2O95490 1459 aa9.97□□□□□ -0.81
DEPDC4-210ENST00000551642 M0R2N6 131 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 TRIM37O94972 964 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 HSPA6P17066 643 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 MAP2K3P46734 347 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 CLDN10P78369 228 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 MAP3K10Q02779 954 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 CCDC102BQ68D86 513 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 FIGNL1Q6PIW4 674 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 SYT17Q9BSW7 474 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 CROCC2H7BZ55 1655 aa9.96□□□□□ -0.82
DEPDC4-210ENST00000551642 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 RNF225M0QZC1 329 aaPredicted RBP9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 SIX5Q8N196 739 aa9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 OGFOD1Q8N543 542 aa9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 ENAMQ9NRM1 1142 aa9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 DNAAF2Q9NVR5 837 aaKnown RBP9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 KIAA1024Q9UPX6 916 aa9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 CCDC9Q9Y3X0 531 aaKnown RBP9.95□□□□□ -0.82
DEPDC4-210ENST00000551642 APBA3O96018 575 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 BCRP11274 1271 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 TEAD4Q15561 434 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 TPCN2Q8NHX9 752 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 ACDQ96AP0 544 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 AIDAQ96BJ3 306 aa9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
DEPDC4-210ENST00000551642 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
DEPDC4-210ENST00000551642 BNIP3LO60238 219 aa9.93□□□□□ -0.82
DEPDC4-210ENST00000551642 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
DEPDC4-210ENST00000551642 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
DEPDC4-210ENST00000551642 CALR3Q96L12 384 aaKnown RBP9.93□□□□□ -0.82
DEPDC4-210ENST00000551642 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms