RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 MPSTP25325 297 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 MTMR3Q13615 1198 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
SCAF11-215ENST00000551391 FAM26DQ5JW98 314 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 SND1Q7KZF4 910 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCAF11-215ENST00000551391 FAM35AQ86V20 835 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 TREML1Q86YW5 311 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 GLYCTKQ8IVS8 523 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-215ENST00000551391 TUT1Q9H6E5 874 aaKnown RBP6.3□□□□□ -1.4
SCAF11-215ENST00000551391 C11orf16Q9NQ32 467 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 ANO2Q9NQ90 1003 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 OPLAHO14841 1288 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 ZBTB39O15060 712 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 HYAL3O43820 417 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-215ENST00000551391 CPB1P15086 417 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 INPP5BP32019 993 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
SCAF11-215ENST00000551391 ARHGAP4P98171 946 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 MSL1Q68DK7 614 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 DTWD1Q8N5C7 304 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 FAM13BQ9NYF5 915 aa6.29□□□□□ -1.4
SCAF11-215ENST00000551391 ZAP70P43403 619 aa6.28□□□□□ -1.4
SCAF11-215ENST00000551391 IDH3AP50213 366 aa6.28□□□□□ -1.4
SCAF11-215ENST00000551391 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
SCAF11-215ENST00000551391 WFDC8Q8IUA0 241 aa6.28□□□□□ -1.4
SCAF11-215ENST00000551391 IREB2P48200 963 aaKnown RBP6.27□□□□□ -1.41
SCAF11-215ENST00000551391 ARSDP51689 593 aa6.27□□□□□ -1.41
SCAF11-215ENST00000551391 FBXO11Q86XK2 927 aa6.27□□□□□ -1.41
SCAF11-215ENST00000551391 WFDC12Q8WWY7 111 aa6.27□□□□□ -1.41
SCAF11-215ENST00000551391 FRRS1LQ9P0K9 344 aa6.27□□□□□ -1.41
SCAF11-215ENST00000551391 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
SCAF11-215ENST00000551391 MAP3K6O95382 1288 aa6.26□□□□□ -1.41
SCAF11-215ENST00000551391 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-215ENST00000551391 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
SCAF11-215ENST00000551391 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
SCAF11-215ENST00000551391 KRT25Q7Z3Z0 450 aa6.26□□□□□ -1.41
SCAF11-215ENST00000551391 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
SCAF11-215ENST00000551391 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
SCAF11-215ENST00000551391 FZD6O60353 706 aa6.25□□□□□ -1.41
SCAF11-215ENST00000551391 EGFRP00533 1210 aa6.25□□□□□ -1.41
SCAF11-215ENST00000551391 RPLP1P05386 114 aaKnown RBP6.25□□□□□ -1.41
SCAF11-215ENST00000551391 LPIN3Q9BQK8 851 aa6.25□□□□□ -1.41
SCAF11-215ENST00000551391 SSBP4Q9BWG4 385 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-215ENST00000551391 BIN2Q9UBW5 565 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-215ENST00000551391 RARAP10276 462 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 GRNP28799 593 aaKnown RBP6.24□□□□□ -1.41
SCAF11-215ENST00000551391 USP5P45974 858 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 MLLT1Q03111 559 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-215ENST00000551391 PERM1Q5SV97 790 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 ATCAYQ86WG3 371 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 TRPM4Q8TD43 1214 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 TTC9Q92623 222 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 RNF112Q9ULX5 631 aa6.24□□□□□ -1.41
SCAF11-215ENST00000551391 RTCBQ9Y3I0 505 aaKnown RBP6.24□□□□□ -1.41
SCAF11-215ENST00000551391 NDUFB5O43674 189 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 SASH3O75995 380 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 PDGFAP04085 211 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 PCSK2P16519 638 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 TARSP26639 723 aaKnown RBP6.23□□□□□ -1.41
SCAF11-215ENST00000551391 NOS3P29474 1203 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 AAMPQ13685 434 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 GRIK5Q16478 980 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 ILDR2Q71H61 639 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 GPR152Q8TDT2 470 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 EDEM1Q92611 657 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 RBCK1Q9BYM8 510 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 SMG9Q9H0W8 520 aaKnown RBP6.23□□□□□ -1.41
SCAF11-215ENST00000551391 CCDC87Q9NVE4 849 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 FNDC3AQ9Y2H6 1198 aaKnown RBP6.23□□□□□ -1.41
SCAF11-215ENST00000551391 KCNMB2Q9Y691 235 aa6.23□□□□□ -1.41
SCAF11-215ENST00000551391 ZBTB42B2RXF5 422 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 DNM1Q05193 864 aaKnown RBP6.22□□□□□ -1.41
SCAF11-215ENST00000551391 EHHADHQ08426 723 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 CCDC27Q2M243 656 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 TMCO4Q5TGY1 634 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 XKR5Q6UX68 686 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 RGL4Q8IZJ4 473 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 GJD3Q8N144 294 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 NUDT16Q96DE0 195 aaKnown RBP6.22□□□□□ -1.41
SCAF11-215ENST00000551391 ZFATQ9P243 1243 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 POLIQ9UNA4 740 aa6.22□□□□□ -1.41
SCAF11-215ENST00000551391 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.42
SCAF11-215ENST00000551391 GPLD1P80108 840 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 PDE12Q6L8Q7 609 aaKnown RBP6.21□□□□□ -1.42
SCAF11-215ENST00000551391 PRR23CQ6ZRP0 262 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 HFE2Q6ZVN8 426 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 SLC51AQ86UW1 340 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 CMTR1Q8N1G2 835 aaKnown RBP6.21□□□□□ -1.42
SCAF11-215ENST00000551391 FAM129BQ96TA1 746 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 RBSNQ9H1K0 784 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 AKTIPQ9H8T0 292 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
SCAF11-215ENST00000551391 ERCC3P19447 782 aa6.2□□□□□ -1.42
SCAF11-215ENST00000551391 NRLP54845 237 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms