RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SIX5Q8N196 739 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 OGFOD1Q8N543 542 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 IL17RAQ96F46 866 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 MYCBPQ99417 103 aaPredicted RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 FUCA2Q9BTY2 467 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 VRTNQ9H8Y1 702 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ETNK1Q9HBU6 452 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ATP13A2Q9NQ11 1180 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ZNF446Q9NWS9 450 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 SYCE3A1L190 88 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L15C9J2P7 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L10C9JJH3 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L13C9JLJ4 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L12C9JPN9 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L11C9JVI0 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L21D6R901 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L18D6R9N7 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L22D6RA61 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L17D6RBQ6 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L19D6RCP7 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L20D6RJB6 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 IL2RAP01589 272 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 CT47B1P0C2W7 299 aaPredicted RBP6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 RAD51AP2Q09MP3 1159 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 USP17L24Q0WX57 530 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 MCTP1Q6DN14 999 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 WDR63Q8IWG1 891 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 TSEN34Q9BSV6 310 aaKnown RBP6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 POLR3GLQ9BT43 218 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 KCND1Q9NSA2 647 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 DNAAF2Q9NVR5 837 aaKnown RBP6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 POLKQ9UBT6 870 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 ZMIZ1Q9ULJ6 1067 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 PYCARDQ9ULZ3 195 aa6.36□□□□□ -1.39
LSM3P2-201ENST00000551246 CFAP74Q9C0B2 1584 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ASXL1Q8IXJ9 1541 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ATP10AO60312 1499 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 POLR3AO14802 1390 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 AATKQ6ZMQ8 1374 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 LOC102724159A0A0B4J2E5 919 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 APAF1O14727 1248 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 PRPF40AO75400 957 aaKnown RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ATG7O95352 703 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 BRD1O95696 1058 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 H2AFXP16104 143 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 RASA1P20936 1047 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 CASQ1P31415 396 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 GDF10P55107 478 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 CLN3Q13286 438 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 WDR43Q15061 677 aaKnown RBP eCLIP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 PWP2Q15269 919 aaKnown RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 FOXD4L5Q5VV16 416 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 C17orf53Q8N3J3 647 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 PURBQ96QR8 312 aaKnown RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 TTC12Q9H892 705 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ZNF395Q9H8N7 513 aaPredicted RBP6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 TNNQ9UQP3 1299 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 PBRM1Q86U86 1689 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 DISP1Q96F81 1524 aa6.35□□□□□ -1.39
LSM3P2-201ENST00000551246 ADCY5O95622 1261 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 INHAP05111 366 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 HSP90B1P14625 803 aaKnown RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 ELOAQ14241 798 aaKnown RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 CC2D1BQ5T0F9 858 aaKnown RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 CCDC102BQ68D86 513 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 TPCN2Q8NHX9 752 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 INSM2Q96T92 566 aaPredicted RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 FHDC1Q9C0D6 1143 aaPredicted RBP6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 RASSF4Q9H2L5 321 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 DONSONQ9NYP3 566 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 RSPH14Q9UHP6 348 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 PAXBP1Q9Y5B6 917 aa6.34□□□□□ -1.39
LSM3P2-201ENST00000551246 CCDC141Q6ZP82 1450 aa6.34□□□□□ -1.4
LSM3P2-201ENST00000551246 NESP48681 1621 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 PTPRCP08575 1304 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 SOS2Q07890 1332 aaPredicted RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 AP5Z1O43299 807 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CPP00450 1065 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CTSOP43234 321 aaPredicted RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 EPHA4P54764 986 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CUL4AQ13619 759 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 PKP1Q13835 747 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 MLECQ14165 292 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CT47A1Q5JQC4 288 aaPredicted RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 SUGP1Q8IWZ8 645 aaKnown RBP6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 CNKSR1Q969H4 720 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
LSM3P2-201ENST00000551246 ESYT1Q9BSJ8 1104 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms