RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, humanhuman

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-208ENST00000550811 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
TUBA1A-208ENST00000550811 LRRFIP2Q9Y608 721 aaKnown RBP11.91□□□□□ -0.5
TUBA1A-208ENST00000550811 IRS4O14654 1257 aaPredicted RBP11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 PRR5LQ6MZQ0 368 aa11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 IL27Q8NEV9 243 aa11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
TUBA1A-208ENST00000550811 C10orf71Q711Q0 1435 aa11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 POLD1P28340 1107 aa11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 CTSWP56202 376 aa11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
TUBA1A-208ENST00000550811 PDE8AO60658 829 aa11.88□□□□□ -0.51
TUBA1A-208ENST00000550811 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
TUBA1A-208ENST00000550811 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
TUBA1A-208ENST00000550811 KAZALD1Q96I82 304 aa11.88□□□□□ -0.51
TUBA1A-208ENST00000550811 LRP5O75197 1615 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 TRIM66O15016 1216 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 FOXO4P98177 505 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 PDE4DQ08499 809 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 RABL6Q3YEC7 729 aaPredicted RBP11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 SLC10A5Q5PT55 438 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
TUBA1A-208ENST00000550811 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
TUBA1A-208ENST00000550811 MTX1Q13505 466 aa11.86□□□□□ -0.51
TUBA1A-208ENST00000550811 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
TUBA1A-208ENST00000550811 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
TUBA1A-208ENST00000550811 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
TUBA1A-208ENST00000550811 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 HMMRO75330 724 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 SPON1Q9HCB6 807 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
TUBA1A-208ENST00000550811 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 CSF1RP07333 972 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 PDE6BP35913 854 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 PTGER2P43116 358 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 CACNA1SQ13698 1873 aa11.84□□□□□ -0.51
TUBA1A-208ENST00000550811 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 GREM2Q9H772 168 aa11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 TAF1P21675 1872 aa11.83□□□□□ -0.52
TUBA1A-208ENST00000550811 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 ITGA6P23229 1130 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 SIRT2Q8IXJ6 389 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 PPP4R2Q9NY27 417 aa11.82□□□□□ -0.52
TUBA1A-208ENST00000550811 COL4A1P02462 1669 aa11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 RBM17Q96I25 401 aaKnown RBP11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 CDC5LQ99459 802 aaKnown RBP11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
TUBA1A-208ENST00000550811 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 SRGNP10124 158 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 NPR1P16066 1061 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
TUBA1A-208ENST00000550811 H0YIN7 160 aa11.79□□□□□ -0.52
TUBA1A-208ENST00000550811 HOXA10P31260 410 aaPredicted RBP11.79□□□□□ -0.52
TUBA1A-208ENST00000550811 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
TUBA1A-208ENST00000550811 PTPN12Q05209 780 aaKnown RBP11.79□□□□□ -0.52
TUBA1A-208ENST00000550811 GRAPQ13588 217 aa11.79□□□□□ -0.52
TUBA1A-208ENST00000550811 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms