RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
PRDM4-206ENST00000550659 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
PRDM4-206ENST00000550659 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
PRDM4-206ENST00000550659 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
PRDM4-206ENST00000550659 POU4F2Q12837 409 aa8.45□□□□□ -1.06
PRDM4-206ENST00000550659 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.45□□□□□ -1.06
PRDM4-206ENST00000550659 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
PRDM4-206ENST00000550659 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
PRDM4-206ENST00000550659 C12orf49Q9H741 205 aa8.45□□□□□ -1.06
PRDM4-206ENST00000550659 FOXD3Q9UJU5 478 aaPredicted RBP8.45□□□□□ -1.06
PRDM4-206ENST00000550659 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
PRDM4-206ENST00000550659 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
PRDM4-206ENST00000550659 ARHGAP5Q13017 1502 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
PRDM4-206ENST00000550659 RNF217Q8TC41 542 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 ZFYVE28Q9HCC9 887 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 NEUROD4Q9HD90 331 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 FANCAO15360 1455 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 ARAP3Q8WWN8 1544 aa8.44□□□□□ -1.06
PRDM4-206ENST00000550659 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 A0A1B0GTH6 734 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
PRDM4-206ENST00000550659 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
PRDM4-206ENST00000550659 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
PRDM4-206ENST00000550659 USP20Q9Y2K6 914 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 RRBP1Q9P2E9 1410 aaKnown RBP8.43□□□□□ -1.06
PRDM4-206ENST00000550659 CAMSAP2Q08AD1 1489 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
PRDM4-206ENST00000550659 ABCC1P33527 1531 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 FRMPD1Q5SYB0 1578 aa8.43□□□□□ -1.06
PRDM4-206ENST00000550659 EPB42P16452 691 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
PRDM4-206ENST00000550659 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 CMTR1Q8N1G2 835 aaKnown RBP8.42□□□□□ -1.06
PRDM4-206ENST00000550659 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 SRCIN1Q9C0H9 1055 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 ELP3Q9H9T3 547 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 CFDP1Q9UEE9 299 aaPredicted RBP8.42□□□□□ -1.06
PRDM4-206ENST00000550659 PTPRKQ15262 1439 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 AKNAQ7Z591 1439 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 SYCP2Q9BX26 1530 aa8.42□□□□□ -1.06
PRDM4-206ENST00000550659 MBD5Q9P267 1494 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 USP31Q70CQ4 1352 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 PHACTR2O75167 634 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 BMP2P12643 396 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 MSX1P28360 303 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 HNRNPMP52272 730 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRDM4-206ENST00000550659 TYRO3Q06418 890 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
PRDM4-206ENST00000550659 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
PRDM4-206ENST00000550659 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
PRDM4-206ENST00000550659 TANGO6Q9C0B7 1094 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
PRDM4-206ENST00000550659 MIA2Q96PC5 1412 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 IRS1P35568 1242 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 EFCAB2Q5VUJ9 269 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 HS2ST1Q7LGA3 356 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 ACBD3Q9H3P7 528 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.06
PRDM4-206ENST00000550659 DDX41Q9UJV9 622 aaKnown RBP8.4□□□□□ -1.06
PRDM4-206ENST00000550659 ADGRL1O94910 1474 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 NEO1Q92859 1461 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 SCAPERQ9BY12 1400 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 A0A1W2PNR3 127 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 RAPGEF3O95398 923 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 EGFRP00533 1210 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
PRDM4-206ENST00000550659 MMRN1Q13201 1228 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 FAM50AQ14320 339 aaKnown RBP8.39□□□□□ -1.07
PRDM4-206ENST00000550659 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
PRDM4-206ENST00000550659 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 ZNF654Q8IZM8 581 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 GMLQ99445 158 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 CRISPLD1Q9H336 500 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 RICTORQ6R327 1708 aa8.39□□□□□ -1.07
PRDM4-206ENST00000550659 ABCC5O15440 1437 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 XYLBO75191 536 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
PRDM4-206ENST00000550659 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
PRDM4-206ENST00000550659 AFAP1Q8N556 730 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 ARMC5Q96C12 935 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms