RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
SCAF11-213ENST00000550629 GRIN2CQ14957 1233 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 ANKMY2Q8IV38 441 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 GGA1Q9UJY5 639 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 KANK1Q14678 1352 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
SCAF11-213ENST00000550629 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-213ENST00000550629 LGR5O75473 907 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 PCGF6Q9BYE7 350 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 KDM5DQ9BY66 1539 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 ARID4BQ4LE39 1312 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-213ENST00000550629 VWDEQ8N2E2 1590 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
SCAF11-213ENST00000550629 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.05
SCAF11-213ENST00000550629 SIGLEC1Q9BZZ2 1709 aa8.46□□□□□ -1.05
SCAF11-213ENST00000550629 LMTK2Q8IWU2 1503 aa8.46□□□□□ -1.05
SCAF11-213ENST00000550629 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-213ENST00000550629 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-213ENST00000550629 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
SCAF11-213ENST00000550629 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
SCAF11-213ENST00000550629 SCG3Q8WXD2 468 aaKnown RBP8.46□□□□□ -1.06
SCAF11-213ENST00000550629 ARXQ96QS3 562 aa8.46□□□□□ -1.06
SCAF11-213ENST00000550629 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
SCAF11-213ENST00000550629 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
SCAF11-213ENST00000550629 ZC3H13Q5T200 1668 aaKnown RBP8.46□□□□□ -1.06
SCAF11-213ENST00000550629 IQGAP3Q86VI3 1631 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 C2CD2LO14523 706 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 COL8A1P27658 744 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 BAG6P46379 1132 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 CTBSQ01459 385 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 CHMP3Q9Y3E7 222 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 NUP155O75694 1391 aa8.45□□□□□ -1.06
SCAF11-213ENST00000550629 GNB5O14775 395 aa8.44□□□□□ -1.06
SCAF11-213ENST00000550629 ARAFP10398 606 aa8.44□□□□□ -1.06
SCAF11-213ENST00000550629 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
SCAF11-213ENST00000550629 GGT6Q6P531 493 aa8.44□□□□□ -1.06
SCAF11-213ENST00000550629 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
SCAF11-213ENST00000550629 ABCC3O15438 1527 aa8.44□□□□□ -1.06
SCAF11-213ENST00000550629 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 NEURL1BA8MQ27 555 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
SCAF11-213ENST00000550629 EPXP11678 715 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 TNP2Q05952 138 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
SCAF11-213ENST00000550629 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
SCAF11-213ENST00000550629 WASHC2CQ9Y4E1 1318 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 ARHGAP31Q2M1Z3 1444 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 RPRD2Q5VT52 1461 aaKnown RBP8.43□□□□□ -1.06
SCAF11-213ENST00000550629 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
SCAF11-213ENST00000550629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-213ENST00000550629 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
SCAF11-213ENST00000550629 SRPK2P78362 688 aaKnown RBP8.42□□□□□ -1.06
SCAF11-213ENST00000550629 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 PZPP20742 1482 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 EFCAB6Q5THR3 1501 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 MROH2AA6NES4 1674 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 TET3O43151 1660 aa8.42□□□□□ -1.06
SCAF11-213ENST00000550629 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
SCAF11-213ENST00000550629 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
SCAF11-213ENST00000550629 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
SCAF11-213ENST00000550629 NOVA2Q9UNW9 492 aaKnown RBP8.41□□□□□ -1.06
SCAF11-213ENST00000550629 GPC6Q9Y625 555 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-213ENST00000550629 FURINP09958 794 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 CD33P20138 364 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 IGFBP4P22692 258 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 ADH6P28332 368 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 MLECQ14165 292 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 CCDC97Q96F63 343 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-213ENST00000550629 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
SCAF11-213ENST00000550629 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.07
SCAF11-213ENST00000550629 ZMYM3Q14202 1370 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 EFSO43281 561 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 HOXB4P17483 251 aaPredicted RBP8.39□□□□□ -1.07
SCAF11-213ENST00000550629 DGKGP49619 791 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 FER1L4A9Z1Z3 1794 aa8.39□□□□□ -1.07
SCAF11-213ENST00000550629 CLTCQ00610 1675 aaKnown RBP8.39□□□□□ -1.07
SCAF11-213ENST00000550629 MADDQ8WXG6 1647 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms