RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 FMNL2Q96PY5 1086 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 LRP6O75581 1613 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
SMARCC2-208ENST00000550150 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 BTBD11A6QL63 1104 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 TOM1O60784 492 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 CARD10Q9BWT7 1032 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
SMARCC2-208ENST00000550150 TPM3P06753 285 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 CHGBP05060 677 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 USP16Q9Y5T5 823 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 HSP90AB4PQ58FF6 505 aa12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
SMARCC2-208ENST00000550150 EVA1CP58658 441 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 CCDC144CPQ8IYA2 1237 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 USP27XA6NNY8 438 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 PDCP20941 246 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 GORABQ5T7V8 394 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 ZBTB9Q96C00 473 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 SLC27A2O14975 620 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 PIP4K2AP48426 406 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 ZNF75DP51815 510 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
SMARCC2-208ENST00000550150 KAT6BQ8WYB5 2073 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 PSMA5P28066 241 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 BRF1Q92994 677 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 ITGB4P16144 1822 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 IL2RBP14784 551 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
SMARCC2-208ENST00000550150 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 AOX1Q06278 1338 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 BEND3Q5T5X7 828 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 GTPBP4Q9BZE4 634 aaKnown RBP12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.398e-7■■■■□ 20.9
SMARCC2-208ENST00000550150 SKILP12757 684 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 MYL6BP14649 208 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 POLA2Q14181 598 aa12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
SMARCC2-208ENST00000550150 NUP188Q5SRE5 1749 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 NECTIN1Q15223 517 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 PTPN14Q15678 1187 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 SLIT2O94813 1529 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 ZBTB22O15209 634 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 C11orf57Q6ZUT1 292 aaPredicted RBP12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
SMARCC2-208ENST00000550150 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 SMTNL1A8MU46 457 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 ME1P48163 572 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 BIN1O00499 593 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 HSPA1LP34931 641 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 ELF2Q15723 593 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 RAB11FIP4Q86YS3 637 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
SMARCC2-208ENST00000550150 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 SMC2O95347 1197 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms