RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TAF7LQ5H9L4 462 aa32.62■■■□□ 2.81
CPSF6-205ENST00000550075 HDAC5Q9UQL6 1122 aa32.62■■■□□ 2.81
CPSF6-205ENST00000550075 ZNF541Q9H0D2 1346 aa32.61■■■□□ 2.81
CPSF6-205ENST00000550075 UFL1O94874 794 aa32.61■■■□□ 2.81
CPSF6-205ENST00000550075 WASHC4Q2M389 1173 aa32.61■■■□□ 2.81
CPSF6-205ENST00000550075 TBC1D16Q8TBP0 767 aa32.61■■■□□ 2.81
CPSF6-205ENST00000550075 KIF3CO14782 793 aa32.6■■■□□ 2.81
CPSF6-205ENST00000550075 UBTFL1P0CB47 393 aaPredicted RBP32.6■■■□□ 2.81
CPSF6-205ENST00000550075 BICC1Q9H694 974 aaKnown RBP32.6■■■□□ 2.81
CPSF6-205ENST00000550075 INTS3Q68E01 1043 aaKnown RBP32.59■■■□□ 2.81
CPSF6-205ENST00000550075 C16orf71Q8IYS4 520 aaPredicted RBP32.59■■■□□ 2.81
CPSF6-205ENST00000550075 RRAGCQ9HB90 399 aa32.59■■■□□ 2.81
CPSF6-205ENST00000550075 POLLQ9UGP5 575 aa32.59■■■□□ 2.81
CPSF6-205ENST00000550075 MINPP1Q9UNW1 487 aa32.59■■■□□ 2.81
CPSF6-205ENST00000550075 VEGFAP15692 232 aaPredicted RBP32.58■■■□□ 2.81
CPSF6-205ENST00000550075 ATP2B4P23634 1241 aa32.58■■■□□ 2.81
CPSF6-205ENST00000550075 RABL6Q3YEC7 729 aaPredicted RBP32.58■■■□□ 2.81
CPSF6-205ENST00000550075 KAZALD1Q96I82 304 aa32.58■■■□□ 2.81
CPSF6-205ENST00000550075 ANKRD2Q9GZV1 360 aa32.58■■■□□ 2.81
CPSF6-205ENST00000550075 ZNRF3Q9ULT6 936 aa32.58■■■□□ 2.81
CPSF6-205ENST00000550075 DDNO94850 711 aaPredicted RBP32.57■■■□□ 2.8
CPSF6-205ENST00000550075 GPC2Q8N158 579 aa32.57■■■□□ 2.8
CPSF6-205ENST00000550075 ZC3H12CQ9C0D7 883 aaKnown RBP32.56■■■□□ 2.8
CPSF6-205ENST00000550075 L3MBTL3Q96JM7 780 aaPredicted RBP32.55■■■□□ 2.8
CPSF6-205ENST00000550075 SCN4AP35499 1836 aa32.54■■■□□ 2.8
CPSF6-205ENST00000550075 IQCA1LA6NCM1 817 aa32.54■■■□□ 2.8
CPSF6-205ENST00000550075 FTSJ3Q8IY81 847 aaKnown RBP32.54■■■□□ 2.8
CPSF6-205ENST00000550075 ANKRD44Q8N8A2 993 aa32.54■■■□□ 2.8
CPSF6-205ENST00000550075 CLUAP1Q96AJ1 413 aa32.54■■■□□ 2.8
CPSF6-205ENST00000550075 G3V3G9 751 aa32.53■■■□□ 2.8
CPSF6-205ENST00000550075 RIMBP2O15034 1052 aa32.53■■■□□ 2.8
CPSF6-205ENST00000550075 GNAI3P08754 354 aa32.53■■■□□ 2.8
CPSF6-205ENST00000550075 DCAF8Q5TAQ9 597 aa32.53■■■□□ 2.8
CPSF6-205ENST00000550075 LDHAL6AQ6ZMR3 332 aa32.52■■■□□ 2.8
CPSF6-205ENST00000550075 CNNM1Q9NRU3 951 aa32.52■■■□□ 2.8
CPSF6-205ENST00000550075 LEMD3Q9Y2U8 911 aa32.52■■■□□ 2.8
CPSF6-205ENST00000550075 GJA3Q9Y6H8 435 aa32.52■■■□□ 2.8
CPSF6-205ENST00000550075 MED23Q9ULK4 1368 aa32.51■■■□□ 2.79
CPSF6-205ENST00000550075 TOMM70O94826 608 aa32.51■■■□□ 2.79
CPSF6-205ENST00000550075 CHRNDQ07001 517 aa32.51■■■□□ 2.79
CPSF6-205ENST00000550075 A0A1B0GUL6 1792 aa32.5■■■□□ 2.79
CPSF6-205ENST00000550075 KCNJ4P48050 445 aa32.5■■■□□ 2.79
CPSF6-205ENST00000550075 C1QTNF8P60827 252 aa32.5■■■□□ 2.79
CPSF6-205ENST00000550075 GPR101Q96P66 508 aaPredicted RBP32.5■■■□□ 2.79
CPSF6-205ENST00000550075 MEIS3Q99687 375 aa32.5■■■□□ 2.79
CPSF6-205ENST00000550075 TNIP1Q15025 636 aa32.49■■■□□ 2.79
CPSF6-205ENST00000550075 CIAPIN1Q6FI81 312 aa32.49■■■□□ 2.79
CPSF6-205ENST00000550075 ZNF594Q96JF6 807 aaPredicted RBP32.49■■■□□ 2.79
CPSF6-205ENST00000550075 DBNDD1Q9H9R9 158 aa32.49■■■□□ 2.79
CPSF6-205ENST00000550075 TNNQ9UQP3 1299 aa32.49■■■□□ 2.79
CPSF6-205ENST00000550075 ECE2O60344 883 aa32.48■■■□□ 2.79
CPSF6-205ENST00000550075 DZIP1LQ8IYY4 767 aaKnown RBP32.48■■■□□ 2.79
CPSF6-205ENST00000550075 RCAN3Q9UKA8 241 aa32.48■■■□□ 2.79
CPSF6-205ENST00000550075 LMOD1P29536 600 aaPredicted RBP32.47■■■□□ 2.79
CPSF6-205ENST00000550075 CXCL9Q07325 125 aa32.47■■■□□ 2.79
CPSF6-205ENST00000550075 HACL1Q9UJ83 578 aa32.47■■■□□ 2.79
CPSF6-205ENST00000550075 LRRFIP2Q9Y608 721 aaKnown RBP32.47■■■□□ 2.79
CPSF6-205ENST00000550075 ZNF804BA4D1E1 1349 aa32.47■■■□□ 2.79
CPSF6-205ENST00000550075 MS4A1P11836 297 aa32.46■■■□□ 2.79
CPSF6-205ENST00000550075 TMEM57Q8N5G2 664 aa32.46■■■□□ 2.79
CPSF6-205ENST00000550075 RBM46Q8TBY0 533 aaKnown RBP32.46■■■□□ 2.79
CPSF6-205ENST00000550075 POTECB2RU33 542 aa32.45■■■□□ 2.79
CPSF6-205ENST00000550075 DOK7Q18PE1 504 aa32.45■■■□□ 2.79
CPSF6-205ENST00000550075 YTHDC1Q96MU7 727 aaKnown RBP32.45■■■□□ 2.79
CPSF6-205ENST00000550075 RAD17O75943 681 aa32.44■■■□□ 2.78
CPSF6-205ENST00000550075 YDJCA8MPS7 323 aa32.43■■■□□ 2.78
CPSF6-205ENST00000550075 MROH5Q6ZUA9 1318 aa32.42■■■□□ 2.78
CPSF6-205ENST00000550075 ITPRIPQ8IWB1 547 aa32.41■■■□□ 2.78
CPSF6-205ENST00000550075 HELBQ8NG08 1087 aaPredicted RBP32.41■■■□□ 2.78
CPSF6-205ENST00000550075 TAF1DQ9H5J8 278 aaPredicted RBP32.41■■■□□ 2.78
CPSF6-205ENST00000550075 GNAI2P04899 355 aa32.4■■■□□ 2.78
CPSF6-205ENST00000550075 SMC1BQ8NDV3 1235 aa32.4■■■□□ 2.78
CPSF6-205ENST00000550075 TAF5LO75529 589 aa32.39■■■□□ 2.78
CPSF6-205ENST00000550075 EPHX2P34913 555 aa32.39■■■□□ 2.78
CPSF6-205ENST00000550075 FSTL1Q12841 308 aa32.39■■■□□ 2.78
CPSF6-205ENST00000550075 PODNQ7Z5L7 613 aa32.39■■■□□ 2.78
CPSF6-205ENST00000550075 PSME4Q14997 1843 aa32.39■■■□□ 2.78
CPSF6-205ENST00000550075 PLIN1O60240 522 aa32.38■■■□□ 2.77
CPSF6-205ENST00000550075 SCNN1DP51172 638 aa32.38■■■□□ 2.77
CPSF6-205ENST00000550075 PNMA8AQ86V59 439 aaPredicted RBP32.38■■■□□ 2.77
CPSF6-205ENST00000550075 PUS3Q9BZE2 481 aaKnown RBP32.38■■■□□ 2.77
CPSF6-205ENST00000550075 COA1Q9GZY4 146 aa32.38■■■□□ 2.77
CPSF6-205ENST00000550075 SCN9AQ15858 1988 aa32.38■■■□□ 2.77
CPSF6-205ENST00000550075 GMPSP49915 693 aaPredicted RBP32.37■■■□□ 2.77
CPSF6-205ENST00000550075 METTL24Q5JXM2 366 aa32.37■■■□□ 2.77
CPSF6-205ENST00000550075 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.37■■■□□ 2.77
CPSF6-205ENST00000550075 RIPOR2Q9Y4F9 1068 aa32.37■■■□□ 2.77
CPSF6-205ENST00000550075 WTIPA6NIX2 430 aaPredicted RBP32.36■■■□□ 2.77
CPSF6-205ENST00000550075 PSMD14O00487 310 aa32.36■■■□□ 2.77
CPSF6-205ENST00000550075 RLBP1P12271 317 aa32.36■■■□□ 2.77
CPSF6-205ENST00000550075 RFX5P48382 616 aaPredicted RBP32.36■■■□□ 2.77
CPSF6-205ENST00000550075 C15orf52Q6ZUT6 534 aaKnown RBP32.36■■■□□ 2.77
CPSF6-205ENST00000550075 GPRC5DQ9NZD1 345 aa32.36■■■□□ 2.77
CPSF6-205ENST00000550075 FBXO3Q9UK99 471 aa32.36■■■□□ 2.77
CPSF6-205ENST00000550075 RPS12P25398 132 aaKnown RBP32.35■■■□□ 2.77
CPSF6-205ENST00000550075 KLHDC4Q8TBB5 520 aa32.35■■■□□ 2.77
CPSF6-205ENST00000550075 EYA2O00167 538 aa32.34■■■□□ 2.77
CPSF6-205ENST00000550075 PTPN12Q05209 780 aaKnown RBP32.34■■■□□ 2.77
CPSF6-205ENST00000550075 MTX1Q13505 466 aa32.34■■■□□ 2.77
CPSF6-205ENST00000550075 UBE4AQ14139 1066 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms