RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ITGA6P23229 1130 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 EPHX2P34913 555 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC7-229ENST00000549883 FSTL1Q12841 308 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 WASHC4Q2M389 1173 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-229ENST00000549883 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 ANKIB1Q9P2G1 1089 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
HDAC7-229ENST00000549883 ALDH1L1O75891 902 aa12.41□□□□□ -0.42
HDAC7-229ENST00000549883 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-229ENST00000549883 ALDH1L2Q3SY69 923 aa12.41□□□□□ -0.42
HDAC7-229ENST00000549883 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
HDAC7-229ENST00000549883 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-229ENST00000549883 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
HDAC7-229ENST00000549883 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-229ENST00000549883 CEP350Q5VT06 3117 aa12.41□□□□□ -0.42
HDAC7-229ENST00000549883 PTPRCP08575 1304 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-229ENST00000549883 IQCA1LA6NCM1 817 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 SNAP23O00161 211 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 ECE2O60344 883 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 KLRK1P26718 216 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
HDAC7-229ENST00000549883 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 TXNRD3Q86VQ6 643 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-229ENST00000549883 GGA1Q9UJY5 639 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
HDAC7-229ENST00000549883 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-229ENST00000549883 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
HDAC7-229ENST00000549883 XDHP47989 1333 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 PSME4Q14997 1843 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 PSMD14O00487 310 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC7-229ENST00000549883 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-229ENST00000549883 USP44Q9H0E7 712 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
HDAC7-229ENST00000549883 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
HDAC7-229ENST00000549883 UTYO14607 1347 aa12.38□□□□□ -0.43
HDAC7-229ENST00000549883 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
HDAC7-229ENST00000549883 APLP1P51693 650 aa12.38□□□□□ -0.43
HDAC7-229ENST00000549883 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-229ENST00000549883 LDHDQ86WU2 507 aa12.38□□□□□ -0.43
HDAC7-229ENST00000549883 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
HDAC7-229ENST00000549883 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
HDAC7-229ENST00000549883 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 TAF5LO75529 589 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 BCAR3O75815 825 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 CHRNDQ07001 517 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 EYA3Q99504 573 aa12.37□□□□□ -0.43
HDAC7-229ENST00000549883 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
HDAC7-229ENST00000549883 EGFRP00533 1210 aa12.36□□□□□ -0.43
HDAC7-229ENST00000549883 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-229ENST00000549883 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
HDAC7-229ENST00000549883 TNIP1Q15025 636 aa12.36□□□□□ -0.43
HDAC7-229ENST00000549883 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
HDAC7-229ENST00000549883 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
HDAC7-229ENST00000549883 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
HDAC7-229ENST00000549883 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-229ENST00000549883 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
HDAC7-229ENST00000549883 SAMD7Q7Z3H4 446 aa12.35□□□□□ -0.43
HDAC7-229ENST00000549883 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-229ENST00000549883 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
HDAC7-229ENST00000549883 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
HDAC7-229ENST00000549883 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
HDAC7-229ENST00000549883 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
HDAC7-229ENST00000549883 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 TRAF5O00463 557 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 PLIN1O60240 522 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-229ENST00000549883 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 KLHDC4Q8TBB5 520 aa12.34□□□□□ -0.43
HDAC7-229ENST00000549883 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
HDAC7-229ENST00000549883 ASTN2O75129 1339 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-229ENST00000549883 G3V3G9 751 aa12.33□□□□□ -0.44
HDAC7-229ENST00000549883 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
HDAC7-229ENST00000549883 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
HDAC7-229ENST00000549883 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
HDAC7-229ENST00000549883 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
HDAC7-229ENST00000549883 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-229ENST00000549883 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
HDAC7-229ENST00000549883 LEMD3Q9Y2U8 911 aa12.33□□□□□ -0.44
HDAC7-229ENST00000549883 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms