RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 MYH3P11055 1940 aa30.77■■■□□ 2.52
USP44-205ENST00000549639 TMEM88BA6NKF7 163 aa30.76■■■□□ 2.51
USP44-205ENST00000549639 RIMBP2O15034 1052 aa30.76■■■□□ 2.51
USP44-205ENST00000549639 XDHP47989 1333 aa30.75■■■□□ 2.51
USP44-205ENST00000549639 UFL1O94874 794 aa30.74■■■□□ 2.51
USP44-205ENST00000549639 DPF2Q92785 391 aa30.74■■■□□ 2.51
USP44-205ENST00000549639 DBNDD1Q9H9R9 158 aa30.74■■■□□ 2.51
USP44-205ENST00000549639 BSDC1Q9NW68 430 aaPredicted RBP30.74■■■□□ 2.51
USP44-205ENST00000549639 GREM2Q9H772 168 aa30.73■■■□□ 2.51
USP44-205ENST00000549639 ECE2O60344 883 aa30.72■■■□□ 2.51
USP44-205ENST00000549639 ATP2B4P23634 1241 aa30.72■■■□□ 2.51
USP44-205ENST00000549639 H7C1D1 291 aa30.71■■■□□ 2.51
USP44-205ENST00000549639 RPS12P25398 132 aaKnown RBP30.71■■■□□ 2.51
USP44-205ENST00000549639 CASP7P55210 303 aa30.71■■■□□ 2.51
USP44-205ENST00000549639 E9PSI1 815 aa30.7■■■□□ 2.51
USP44-205ENST00000549639 G3V3G9 751 aa30.7■■■□□ 2.51
USP44-205ENST00000549639 DCAF8Q5TAQ9 597 aa30.7■■■□□ 2.51
USP44-205ENST00000549639 ZC3H15Q8WU90 426 aaKnown RBP30.7■■■□□ 2.51
USP44-205ENST00000549639 CNOT7Q9UIV1 285 aaKnown RBP30.7■■■□□ 2.51
USP44-205ENST00000549639 PSMD14O00487 310 aa30.69■■■□□ 2.5
USP44-205ENST00000549639 CSF1RP07333 972 aa30.69■■■□□ 2.5
USP44-205ENST00000549639 DOK7Q18PE1 504 aa30.69■■■□□ 2.5
USP44-205ENST00000549639 BEND3Q5T5X7 828 aa30.69■■■□□ 2.5
USP44-205ENST00000549639 CCER2I3L3R5 266 aa30.68■■■□□ 2.5
USP44-205ENST00000549639 IGHMBP2P38935 993 aaKnown RBP30.68■■■□□ 2.5
USP44-205ENST00000549639 PGAP2Q9UHJ9 254 aa30.68■■■□□ 2.5
USP44-205ENST00000549639 CNTNAP1P78357 1384 aa30.67■■■□□ 2.5
USP44-205ENST00000549639 F6X3S4 739 aa30.67■■■□□ 2.5
USP44-205ENST00000549639 GPR101Q96P66 508 aaPredicted RBP30.67■■■□□ 2.5
USP44-205ENST00000549639 MKRN1Q9UHC7 482 aaKnown RBP30.67■■■□□ 2.5
USP44-205ENST00000549639 MINPP1Q9UNW1 487 aa30.67■■■□□ 2.5
USP44-205ENST00000549639 PCNTO95613 3336 aa30.65■■■□□ 2.5
USP44-205ENST00000549639 ITGA6P23229 1130 aa30.65■■■□□ 2.5
USP44-205ENST00000549639 MICALL2Q8IY33 904 aa30.65■■■□□ 2.5
USP44-205ENST00000549639 VIL1P09327 827 aaKnown RBP30.64■■■□□ 2.5
USP44-205ENST00000549639 ZBTB12Q9Y330 459 aaPredicted RBP30.64■■■□□ 2.5
USP44-205ENST00000549639 ALDH1L1O75891 902 aa30.63■■■□□ 2.49
USP44-205ENST00000549639 PODNQ7Z5L7 613 aa30.63■■■□□ 2.49
USP44-205ENST00000549639 MPHOSPH8Q99549 860 aa30.63■■■□□ 2.49
USP44-205ENST00000549639 ANKRD2Q9GZV1 360 aa30.63■■■□□ 2.49
USP44-205ENST00000549639 MED23Q9ULK4 1368 aa30.63■■■□□ 2.49
USP44-205ENST00000549639 CCT4P50991 539 aaKnown RBP30.62■■■□□ 2.49
USP44-205ENST00000549639 FAM161AQ3B820 660 aa30.62■■■□□ 2.49
USP44-205ENST00000549639 KCNQ5Q9NR82 932 aa30.62■■■□□ 2.49
USP44-205ENST00000549639 LEMD3Q9Y2U8 911 aa30.62■■■□□ 2.49
USP44-205ENST00000549639 ANKRD18BA2A2Z9 1011 aa30.61■■■□□ 2.49
USP44-205ENST00000549639 RASSF10A6NK89 507 aa30.61■■■□□ 2.49
USP44-205ENST00000549639 GRM8O00222 908 aa30.61■■■□□ 2.49
USP44-205ENST00000549639 HIRAP54198 1017 aaPredicted RBP30.61■■■□□ 2.49
USP44-205ENST00000549639 SLFN5Q08AF3 891 aa30.61■■■□□ 2.49
USP44-205ENST00000549639 ZNF609O15014 1411 aa30.61■■■□□ 2.49
USP44-205ENST00000549639 TRPM4Q8TD43 1214 aa30.6■■■□□ 2.49
USP44-205ENST00000549639 SRCIN1Q9C0H9 1055 aa30.6■■■□□ 2.49
USP44-205ENST00000549639 DEFB115Q30KQ5 88 aa30.59■■■□□ 2.49
USP44-205ENST00000549639 CDC37L1Q7L3B6 337 aa30.59■■■□□ 2.49
USP44-205ENST00000549639 AGBL3Q8NEM8 1001 aa30.59■■■□□ 2.49
USP44-205ENST00000549639 C9orf78Q9NZ63 289 aaPredicted RBP30.59■■■□□ 2.49
USP44-205ENST00000549639 FOXO4P98177 505 aa30.58■■■□□ 2.49
USP44-205ENST00000549639 IFIT5Q13325 482 aaKnown RBP30.58■■■□□ 2.49
USP44-205ENST00000549639 SLC4A10Q6U841 1118 aa30.58■■■□□ 2.49
USP44-205ENST00000549639 ABT1Q9ULW3 272 aaKnown RBP30.58■■■□□ 2.49
USP44-205ENST00000549639 SPEF2Q9C093 1822 aa30.58■■■□□ 2.49
USP44-205ENST00000549639 PTPRCP08575 1304 aa30.57■■■□□ 2.48
USP44-205ENST00000549639 RSBN1LQ6PCB5 846 aaPredicted RBP30.57■■■□□ 2.48
USP44-205ENST00000549639 MRPL50Q8N5N7 158 aaKnown RBP30.57■■■□□ 2.48
USP44-205ENST00000549639 SCN9AQ15858 1988 aa30.57■■■□□ 2.48
USP44-205ENST00000549639 TRPM7Q96QT4 1865 aa30.57■■■□□ 2.48
USP44-205ENST00000549639 SHTN1A0MZ66 631 aa30.56■■■□□ 2.48
USP44-205ENST00000549639 TRAF5O00463 557 aa30.56■■■□□ 2.48
USP44-205ENST00000549639 HSPA1AP0DMV8 641 aaKnown RBP30.56■■■□□ 2.48
USP44-205ENST00000549639 HSPA1BP0DMV9 641 aaKnown RBP30.56■■■□□ 2.48
USP44-205ENST00000549639 VEGFBP49765 207 aa30.56■■■□□ 2.48
USP44-205ENST00000549639 USP17L3A6NCW0 530 aa30.55■■■□□ 2.48
USP44-205ENST00000549639 USP17L4A6NCW7 530 aa30.55■■■□□ 2.48
USP44-205ENST00000549639 USP17L1Q7RTZ2 530 aa30.55■■■□□ 2.48
USP44-205ENST00000549639 SAMD7Q7Z3H4 446 aa30.55■■■□□ 2.48
USP44-205ENST00000549639 COA1Q9GZY4 146 aa30.55■■■□□ 2.48
USP44-205ENST00000549639 PSME4Q14997 1843 aa30.54■■■□□ 2.48
USP44-205ENST00000549639 ZNF804BA4D1E1 1349 aa30.54■■■□□ 2.48
USP44-205ENST00000549639 TBC1D10BQ4KMP7 808 aaPredicted RBP30.54■■■□□ 2.48
USP44-205ENST00000549639 CST9Q5W186 159 aa30.54■■■□□ 2.48
USP44-205ENST00000549639 GLIS2Q9BZE0 524 aaPredicted RBP30.54■■■□□ 2.48
USP44-205ENST00000549639 ALDH1L2Q3SY69 923 aa30.53■■■□□ 2.48
USP44-205ENST00000549639 LMBR1LQ6UX01 489 aa30.53■■■□□ 2.48
USP44-205ENST00000549639 CHMP3Q9Y3E7 222 aa30.53■■■□□ 2.48
USP44-205ENST00000549639 FMR1Q06787 632 aaKnown RBP eCLIP30.52■■■□□ 2.48
USP44-205ENST00000549639 CHRNDQ07001 517 aa30.52■■■□□ 2.48
USP44-205ENST00000549639 CCDC57Q2TAC2 916 aa30.52■■■□□ 2.48
USP44-205ENST00000549639 IFFO2Q5TF58 517 aa30.52■■■□□ 2.48
USP44-205ENST00000549639 CT47B1P0C2W7 299 aaPredicted RBP30.51■■■□□ 2.47
USP44-205ENST00000549639 KCNJ4P48050 445 aa30.51■■■□□ 2.47
USP44-205ENST00000549639 ZNF280AP59817 542 aaPredicted RBP30.51■■■□□ 2.47
USP44-205ENST00000549639 KIF4BQ2VIQ3 1234 aa30.51■■■□□ 2.47
USP44-205ENST00000549639 TRMT2AQ8IZ69 625 aaKnown RBP30.51■■■□□ 2.47
USP44-205ENST00000549639 SSH1Q8WYL5 1049 aa30.51■■■□□ 2.47
USP44-205ENST00000549639 TLL2Q9Y6L7 1015 aa30.51■■■□□ 2.47
USP44-205ENST00000549639 WTIPA6NIX2 430 aaPredicted RBP30.5■■■□□ 2.47
USP44-205ENST00000549639 CELF2O95319 508 aaKnown RBP30.5■■■□□ 2.47
USP44-205ENST00000549639 ECE1P42892 770 aa30.5■■■□□ 2.47
USP44-205ENST00000549639 DCPSQ96C86 337 aaKnown RBP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms