RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 ARHGEF6Q15052 776 aa11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 MTMR10Q9NXD2 777 aa11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 SIPA1L3O60292 1781 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 SNRPA1P09661 255 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 PRKG1Q13976 671 aa11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
SMARCD1-207ENST00000549526 TAF1P21675 1872 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 GNAT3A8MTJ3 354 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 IGF2BP3O00425 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 CAP1Q01518 475 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 CRHR2Q13324 411 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 RAPGEFL1Q9UHV5 662 aa11.17□□□□□ -0.62
SMARCD1-207ENST00000549526 SPTBN5Q9NRC6 3674 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 ERVV-1B6SEH8 477 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 C6orf229H3BNL8 230 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 ECE2O60344 883 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 MORC1Q86VD1 984 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 FAM122AQ96E09 287 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
SMARCD1-207ENST00000549526 UBN2Q6ZU65 1347 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 G3V3G9 751 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 EVI5O60447 810 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 NTSR2O95665 410 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 PLA2G5P39877 138 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 ZNF280AP59817 542 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 KIF6Q6ZMV9 814 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 DDX46Q7L014 1031 aaKnown RBP11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 MYOZ2Q9NPC6 264 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 LAMB4A4D0S4 1761 aa11.15□□□□□ -0.62
SMARCD1-207ENST00000549526 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.63
SMARCD1-207ENST00000549526 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
SMARCD1-207ENST00000549526 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
SMARCD1-207ENST00000549526 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
SMARCD1-207ENST00000549526 ANGEL1Q9UNK9 670 aaKnown RBP11.14□□□□□ -0.63
SMARCD1-207ENST00000549526 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 EYSQ5T1H1 3165 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 LDLRAD1Q5T700 205 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
SMARCD1-207ENST00000549526 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 GRAPQ13588 217 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 MTFR1Q15390 333 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 AGBL3Q8NEM8 1001 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 GRAPLQ8TC17 118 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 EYA3Q99504 573 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 POLLQ9UGP5 575 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 ANKRD36CQ5JPF3 1778 aa11.12□□□□□ -0.63
SMARCD1-207ENST00000549526 RPTORQ8N122 1335 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 LAMB2P55268 1798 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 TMC4Q7Z404 712 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 WNK4Q96J92 1243 aa11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 UTP14AQ9BVJ6 771 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
SMARCD1-207ENST00000549526 BMP8BP34820 402 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 GJA8P48165 433 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 BCAMP50895 628 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 PARP10Q53GL7 1025 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 GAS2L2Q8NHY3 880 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 PTPN18Q99952 460 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 FZD1Q9UP38 647 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 RRP7AQ9Y3A4 280 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 PRUNE2Q8WUY3 3088 aa11.1□□□□□ -0.63
SMARCD1-207ENST00000549526 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
SMARCD1-207ENST00000549526 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
SMARCD1-207ENST00000549526 KIF22Q14807 665 aa11.09□□□□□ -0.63
SMARCD1-207ENST00000549526 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
SMARCD1-207ENST00000549526 CLMNQ96JQ2 1002 aa11.09□□□□□ -0.63
SMARCD1-207ENST00000549526 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 GJB1P08034 283 aa11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 MYL6BP14649 208 aa11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 GPSM2P81274 684 aa11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 GIGYF2Q6Y7W6 1299 aaKnown RBP11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 GDF15Q99988 308 aa11.08□□□□□ -0.64
SMARCD1-207ENST00000549526 RNF208Q9H0X6 261 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms