RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
VDR-206ENST00000549336 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
VDR-206ENST00000549336 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
VDR-206ENST00000549336 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
VDR-206ENST00000549336 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
VDR-206ENST00000549336 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
VDR-206ENST00000549336 TRAF1Q13077 416 aa13.74□□□□□ -0.21
VDR-206ENST00000549336 TPM2P07951 284 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 C2CD5Q86YS7 1000 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
VDR-206ENST00000549336 FEZ1Q99689 392 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 TNNI3KQ59H18 835 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 KRT23Q9C075 422 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 FPGT-TNNI3KV9GXZ4 949 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 C3P01024 1663 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 IFIT3O14879 490 aaKnown RBP13.73□□□□□ -0.21
VDR-206ENST00000549336 KIF5BP33176 963 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 FOSBP53539 338 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 CATIPQ7Z7H3 387 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 NCOA7Q8NI08 942 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 SERPINB2P05120 415 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
VDR-206ENST00000549336 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
VDR-206ENST00000549336 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 SLC12A7Q9Y666 1083 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 RAD50Q92878 1312 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 STK3Q13188 491 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 SLC4A4Q9Y6R1 1079 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 ZNF521Q96K83 1311 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 F8W031 263 aaPredicted RBP13.72□□□□□ -0.21
VDR-206ENST00000549336 SDSP20132 328 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 AOX1Q06278 1338 aa13.72□□□□□ -0.21
VDR-206ENST00000549336 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
VDR-206ENST00000549336 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
VDR-206ENST00000549336 ESR2Q92731 530 aa13.71□□□□□ -0.21
VDR-206ENST00000549336 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
VDR-206ENST00000549336 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
VDR-206ENST00000549336 ANKRD20A12PQ8NF67 263 aa13.71□□□□□ -0.21
VDR-206ENST00000549336 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.21
VDR-206ENST00000549336 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
VDR-206ENST00000549336 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.21
VDR-206ENST00000549336 BECN2A8MW95 431 aa13.71□□□□□ -0.22
VDR-206ENST00000549336 BBOX1O75936 387 aa13.71□□□□□ -0.22
VDR-206ENST00000549336 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 HMGN5P82970 282 aaKnown RBP13.7□□□□□ -0.22
VDR-206ENST00000549336 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 NARFQ9UHQ1 456 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 DNTTIP2Q5QJE6 756 aaKnown RBP13.7□□□□□ -0.22
VDR-206ENST00000549336 CDK5RAP3Q96JB5 506 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 TIMM10P62072 90 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 SSH3Q8TE77 659 aa13.7□□□□□ -0.22
VDR-206ENST00000549336 MCM5P33992 734 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 STK38Q15208 465 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 NEK1Q96PY6 1258 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 KAT14Q9H8E8 782 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
VDR-206ENST00000549336 CCDC12Q8WUD4 166 aaPredicted RBP13.69□□□□□ -0.22
VDR-206ENST00000549336 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
VDR-206ENST00000549336 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
VDR-206ENST00000549336 CD163L1Q9NR16 1453 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 PPIP5K2O43314 1243 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 SSFA2P28290 1259 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 GPR162Q16538 588 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 WWC3Q9ULE0 1092 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 ANAPC15P60006 121 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
VDR-206ENST00000549336 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
VDR-206ENST00000549336 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
VDR-206ENST00000549336 GNAQP50148 359 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
VDR-206ENST00000549336 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms