RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
EFCAB2-215ENST00000549220 EVC2Q86UK5 1308 aa8.23□□□□□ -1.09
EFCAB2-215ENST00000549220 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
EFCAB2-215ENST00000549220 JCADQ9P266 1359 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 PLCH1Q4KWH8 1693 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 APBB1O00213 710 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 ITGB2P05107 769 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 C4orf17Q53FE4 359 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 KRT28Q7Z3Y7 464 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 TIMMDC1Q9NPL8 285 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 NDFIP2Q9NV92 336 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
EFCAB2-215ENST00000549220 LTN1O94822 1766 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 GDF11O95390 407 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 RIPOR1Q6ZS17 1223 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 TMC1Q8TDI8 760 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 LRP6O75581 1613 aa8.21□□□□□ -1.1
EFCAB2-215ENST00000549220 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 H7C1W4 665 aa8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 NUTM2GQ5VZR2 741 aa8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 PIK3C2AO00443 1686 aa8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
EFCAB2-215ENST00000549220 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 ACEP12821 1306 aa8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 TNS3Q68CZ2 1445 aa8.19□□□□□ -1.1
EFCAB2-215ENST00000549220 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 PIK3CDO00329 1044 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 HSPA5P11021 654 aaKnown RBP8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 IRS1P35568 1242 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 PHKA2P46019 1235 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 USP4Q13107 963 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 CFHR5Q9BXR6 569 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
EFCAB2-215ENST00000549220 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 C2CD2LO14523 706 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 BCRP11274 1271 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 MSX1P28360 303 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 C8orf37Q96NL8 207 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 PCDHGA11Q9Y5H2 935 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 USP3Q9Y6I4 520 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 SPATA31A3Q5VYP0 1347 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 ATAD2Q6PL18 1390 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 KAT6BQ8WYB5 2073 aa8.17□□□□□ -1.1
EFCAB2-215ENST00000549220 ZBTB7CA1YPR0 619 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 INHAP05111 366 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 TMF1P82094 1093 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 KTN1Q86UP2 1357 aaKnown RBP8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 TESK2Q96S53 571 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 ALG2Q9H553 416 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 NWD2Q9ULI1 1742 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
EFCAB2-215ENST00000549220 BRWD3Q6RI45 1802 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 RGPD2P0DJD1 1756 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 COL14A1Q05707 1796 aaKnown RBP8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 RNF225M0QZC1 329 aaPredicted RBP8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 OIP5O43482 229 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 ATP4AP20648 1035 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 ABL2P42684 1182 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 MTFR1Q15390 333 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 SLC4A9Q96Q91 983 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 SLC12A5Q9H2X9 1139 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 GPAMQ9HCL2 828 aa8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 DNMT3AQ9Y6K1 912 aaPredicted RBP8.15□□□□□ -1.1
EFCAB2-215ENST00000549220 NRAPQ86VF7 1730 aa8.15□□□□□ -1.11
EFCAB2-215ENST00000549220 USP6P35125 1406 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 SBNO1A3KN83 1393 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 POLR3AO14802 1390 aaPredicted RBP8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 ARHGEF10O15013 1369 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 AFF2P51816 1311 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 SHISA8B8ZZ34 492 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 MX2P20592 715 aa8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 SUZ12Q15022 739 aaKnown RBP8.14□□□□□ -1.11
EFCAB2-215ENST00000549220 MAP7D1Q3KQU3 841 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms