RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF280AP59817 542 aaPredicted RBP11.14□□□□□ -0.63
TROAP-208ENST00000548817 GRAPQ13588 217 aa11.14□□□□□ -0.63
TROAP-208ENST00000548817 WASHC4Q2M389 1173 aa11.14□□□□□ -0.63
TROAP-208ENST00000548817 GIGYF2Q6Y7W6 1299 aaKnown RBP11.14□□□□□ -0.63
TROAP-208ENST00000548817 DDX46Q7L014 1031 aaKnown RBP11.14□□□□□ -0.63
TROAP-208ENST00000548817 GRAPLQ8TC17 118 aaPredicted RBP11.14□□□□□ -0.63
TROAP-208ENST00000548817 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
TROAP-208ENST00000548817 COL6A3P12111 3177 aa11.14□□□□□ -0.63
TROAP-208ENST00000548817 H0YGN5 161 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 MYL6BP14649 208 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 ANGEL2Q5VTE6 544 aaKnown RBP11.13□□□□□ -0.63
TROAP-208ENST00000548817 TTLL7Q6ZT98 887 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
TROAP-208ENST00000548817 DBNDD1Q9H9R9 158 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 PTPN22Q9Y2R2 807 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
TROAP-208ENST00000548817 ERBB4Q15303 1308 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 ECE2O60344 883 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
TROAP-208ENST00000548817 TCIRG1Q13488 830 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 EYA3Q99504 573 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 LAMB1P07942 1786 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 KDM3BQ7LBC6 1761 aa11.12□□□□□ -0.63
TROAP-208ENST00000548817 ASTN2O75129 1339 aaPredicted RBP11.11□□□□□ -0.63
TROAP-208ENST00000548817 NF2P35240 595 aa11.11□□□□□ -0.63
TROAP-208ENST00000548817 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
TROAP-208ENST00000548817 SCARF1Q14162 830 aa11.11□□□□□ -0.63
TROAP-208ENST00000548817 AGBL3Q8NEM8 1001 aa11.11□□□□□ -0.63
TROAP-208ENST00000548817 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
TROAP-208ENST00000548817 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
TROAP-208ENST00000548817 PSME4Q14997 1843 aa11.1□□□□□ -0.63
TROAP-208ENST00000548817 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
TROAP-208ENST00000548817 TTLL12Q14166 644 aaPredicted RBP11.1□□□□□ -0.63
TROAP-208ENST00000548817 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
TROAP-208ENST00000548817 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
TROAP-208ENST00000548817 TSPYL4Q9UJ04 414 aa11.1□□□□□ -0.63
TROAP-208ENST00000548817 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
TROAP-208ENST00000548817 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
TROAP-208ENST00000548817 HSP90AB3PQ58FF7 597 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 SPRYD7Q5W111 196 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
TROAP-208ENST00000548817 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
TROAP-208ENST00000548817 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
TROAP-208ENST00000548817 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 RIMBP2O15034 1052 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 RIPK4P57078 832 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 ARHGEF6Q15052 776 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
TROAP-208ENST00000548817 ARMC9Q7Z3E5 817 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 IFNL1Q8IU54 200 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TROAP-208ENST00000548817 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
TROAP-208ENST00000548817 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
TROAP-208ENST00000548817 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
TROAP-208ENST00000548817 LDLRAD1Q5T700 205 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
TROAP-208ENST00000548817 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 MYOZ2Q9NPC6 264 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 KCNQ5Q9NR82 932 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 BABAM1Q9NWV8 329 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
TROAP-208ENST00000548817 TAF1P21675 1872 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
TROAP-208ENST00000548817 MMP14P50281 582 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 PTPN12Q05209 780 aaKnown RBP11.06□□□□□ -0.64
TROAP-208ENST00000548817 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 OTUD7BQ6GQQ9 843 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 GMLQ99445 158 aa11.06□□□□□ -0.64
TROAP-208ENST00000548817 G3V3G9 751 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 SP3Q02447 781 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
TROAP-208ENST00000548817 RALBP1Q15311 655 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 NLRP10Q86W26 655 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 CD99L2Q8TCZ2 262 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
TROAP-208ENST00000548817 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
TROAP-208ENST00000548817 GPSM2P81274 684 aa11.04□□□□□ -0.64
TROAP-208ENST00000548817 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
TROAP-208ENST00000548817 TRMT112Q9UI30 125 aaKnown RBP11.04□□□□□ -0.64
TROAP-208ENST00000548817 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 ZNF646O15015 1829 aaPredicted RBP11.03□□□□□ -0.64
TROAP-208ENST00000548817 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
TROAP-208ENST00000548817 CRHR2Q13324 411 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 GPR153Q6NV75 609 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms