RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 METTL24Q5JXM2 366 aa35.43■■■■□ 3.26
BRF1-213ENST00000548421 C2CD5Q86YS7 1000 aa35.43■■■■□ 3.26
BRF1-213ENST00000548421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.43■■■■□ 3.26
BRF1-213ENST00000548421 H0YIN7 160 aa35.42■■■■□ 3.26
BRF1-213ENST00000548421 RGS3P49796 1198 aa35.42■■■■□ 3.26
BRF1-213ENST00000548421 MASTLQ96GX5 879 aa35.42■■■■□ 3.26
BRF1-213ENST00000548421 DLEC1Q9Y238 1755 aa35.42■■■■□ 3.26
BRF1-213ENST00000548421 C16orf71Q8IYS4 520 aaPredicted RBP35.41■■■■□ 3.26
BRF1-213ENST00000548421 GPR108Q9NPR9 543 aa35.41■■■■□ 3.26
BRF1-213ENST00000548421 PTGER2P43116 358 aa35.4■■■■□ 3.26
BRF1-213ENST00000548421 CACNA1SQ13698 1873 aa35.4■■■■□ 3.26
BRF1-213ENST00000548421 TNNI3KQ59H18 835 aa35.39■■■■□ 3.26
BRF1-213ENST00000548421 VGLL2Q8N8G2 317 aa35.39■■■■□ 3.26
BRF1-213ENST00000548421 FPGT-TNNI3KV9GXZ4 949 aa35.39■■■■□ 3.26
BRF1-213ENST00000548421 BBOX1O75936 387 aa35.38■■■■□ 3.25
BRF1-213ENST00000548421 ALDH1B1P30837 517 aa35.38■■■■□ 3.25
BRF1-213ENST00000548421 STYK1Q6J9G0 422 aa35.38■■■■□ 3.25
BRF1-213ENST00000548421 AACSQ86V21 672 aa35.38■■■■□ 3.25
BRF1-213ENST00000548421 EAF2Q96CJ1 260 aaPredicted RBP35.38■■■■□ 3.25
BRF1-213ENST00000548421 ZNF609O15014 1411 aa35.38■■■■□ 3.25
BRF1-213ENST00000548421 CHRNDQ07001 517 aa35.37■■■■□ 3.25
BRF1-213ENST00000548421 OTUD7AQ8TE49 926 aaPredicted RBP35.37■■■■□ 3.25
BRF1-213ENST00000548421 AKAP2Q9Y2D5 859 aa35.37■■■■□ 3.25
BRF1-213ENST00000548421 PDE8BO95263 885 aa35.36■■■■□ 3.25
BRF1-213ENST00000548421 IFIT2P09913 472 aaKnown RBP35.36■■■■□ 3.25
BRF1-213ENST00000548421 SPON1Q9HCB6 807 aa35.36■■■■□ 3.25
BRF1-213ENST00000548421 MINPP1Q9UNW1 487 aa35.36■■■■□ 3.25
BRF1-213ENST00000548421 CHRNA5P30532 468 aa35.35■■■■□ 3.25
BRF1-213ENST00000548421 TMC4Q7Z404 712 aa35.35■■■■□ 3.25
BRF1-213ENST00000548421 SALL3Q9BXA9 1300 aa35.35■■■■□ 3.25
BRF1-213ENST00000548421 LRRC37AA6NMS7 1700 aa35.35■■■■□ 3.25
BRF1-213ENST00000548421 PLEKHM2Q8IWE5 1019 aa35.35■■■■□ 3.25
BRF1-213ENST00000548421 ZNF622Q969S3 477 aaKnown RBP eCLIP35.35■■■■□ 3.25
BRF1-213ENST00000548421 KIAA1551Q9HCM1 1747 aa35.34■■■■□ 3.25
BRF1-213ENST00000548421 MX1P20591 662 aa35.33■■■■□ 3.25
BRF1-213ENST00000548421 HELBQ8NG08 1087 aaPredicted RBP35.33■■■■□ 3.25
BRF1-213ENST00000548421 PPEF1O14829 653 aaPredicted RBP35.32■■■■□ 3.24
BRF1-213ENST00000548421 ANKRD2Q9GZV1 360 aa35.32■■■■□ 3.24
BRF1-213ENST00000548421 CCDC8Q9H0W5 538 aaPredicted RBP35.32■■■■□ 3.24
BRF1-213ENST00000548421 ARAP2Q8WZ64 1704 aa35.32■■■■□ 3.24
BRF1-213ENST00000548421 A0A1B0GUL7 405 aa35.31■■■■□ 3.24
BRF1-213ENST00000548421 PUM3Q15397 648 aaKnown RBP35.31■■■■□ 3.24
BRF1-213ENST00000548421 ATP2B3Q16720 1220 aa35.31■■■■□ 3.24
BRF1-213ENST00000548421 CNKSR1Q969H4 720 aa35.31■■■■□ 3.24
BRF1-213ENST00000548421 TAF5LO75529 589 aa35.3■■■■□ 3.24
BRF1-213ENST00000548421 TGFB2P61812 414 aa35.3■■■■□ 3.24
BRF1-213ENST00000548421 PDE1AP54750 535 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 NEUROD6Q96NK8 337 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 TIMM10P62072 90 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 GPATCH3Q96I76 525 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 OSBPL3Q9H4L5 887 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 TLR7Q9NYK1 1049 aaKnown RBP35.29■■■■□ 3.24
BRF1-213ENST00000548421 STAP2Q9UGK3 403 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 DBNLQ9UJU6 430 aaKnown RBP35.29■■■■□ 3.24
BRF1-213ENST00000548421 CD2APQ9Y5K6 639 aa35.29■■■■□ 3.24
BRF1-213ENST00000548421 SLX4Q8IY92 1834 aa35.28■■■■□ 3.24
BRF1-213ENST00000548421 FGFR2P21802 821 aa35.28■■■■□ 3.24
BRF1-213ENST00000548421 LPIN2Q92539 896 aa35.28■■■■□ 3.24
BRF1-213ENST00000548421 TTC41PQ6P2S7 1318 aa35.27■■■■□ 3.24
BRF1-213ENST00000548421 SP8Q8IXZ3 490 aa35.27■■■■□ 3.24
BRF1-213ENST00000548421 ATP6V0A2Q9Y487 856 aa35.27■■■■□ 3.24
BRF1-213ENST00000548421 AOX1Q06278 1338 aa35.26■■■■□ 3.24
BRF1-213ENST00000548421 DPEP1P16444 411 aa35.26■■■■□ 3.23
BRF1-213ENST00000548421 DBNDD2Q9BQY9 259 aa35.26■■■■□ 3.23
BRF1-213ENST00000548421 PRPF40BQ6NWY9 871 aaKnown RBP35.25■■■■□ 3.23
BRF1-213ENST00000548421 PPP1R1BQ9UD71 204 aaPredicted RBP35.25■■■■□ 3.23
BRF1-213ENST00000548421 XDHP47989 1333 aa35.24■■■■□ 3.23
BRF1-213ENST00000548421 A0A0G2JLW4 131 aa35.24■■■■□ 3.23
BRF1-213ENST00000548421 SLC5A1P13866 664 aa35.24■■■■□ 3.23
BRF1-213ENST00000548421 ECHDC1Q9NTX5 307 aa35.24■■■■□ 3.23
BRF1-213ENST00000548421 UBE4AQ14139 1066 aa35.23■■■■□ 3.23
BRF1-213ENST00000548421 XAGE2Q96GT9 111 aa35.23■■■■□ 3.23
BRF1-213ENST00000548421 ANKIB1Q9P2G1 1089 aa35.23■■■■□ 3.23
BRF1-213ENST00000548421 BRCA1P38398 1863 aaKnown RBP35.23■■■■□ 3.23
BRF1-213ENST00000548421 LTBP1Q14766 1721 aa35.23■■■■□ 3.23
BRF1-213ENST00000548421 KCNA3P22001 575 aa35.22■■■■□ 3.23
BRF1-213ENST00000548421 TSHZ3Q63HK5 1081 aa35.22■■■■□ 3.23
BRF1-213ENST00000548421 SLC51AQ86UW1 340 aa35.22■■■■□ 3.23
BRF1-213ENST00000548421 KLHL34Q8N239 644 aa35.22■■■■□ 3.23
BRF1-213ENST00000548421 TMX4Q9H1E5 349 aaPredicted RBP35.22■■■■□ 3.23
BRF1-213ENST00000548421 IFIT1P09914 478 aaKnown RBP35.22■■■■□ 3.23
BRF1-213ENST00000548421 KCNJ4P48050 445 aa35.22■■■■□ 3.23
BRF1-213ENST00000548421 SNAP23O00161 211 aa35.21■■■■□ 3.23
BRF1-213ENST00000548421 ADORA1P30542 326 aa35.21■■■■□ 3.23
BRF1-213ENST00000548421 TTLL6Q8N841 843 aa35.21■■■■□ 3.23
BRF1-213ENST00000548421 ERC2O15083 957 aa35.2■■■■□ 3.23
BRF1-213ENST00000548421 GPSM2P81274 684 aa35.2■■■■□ 3.23
BRF1-213ENST00000548421 TTC22Q5TAA0 569 aa35.2■■■■□ 3.23
BRF1-213ENST00000548421 LEMD3Q9Y2U8 911 aa35.2■■■■□ 3.23
BRF1-213ENST00000548421 GORABQ5T7V8 394 aa35.19■■■■□ 3.22
BRF1-213ENST00000548421 PI4K2BQ8TCG2 481 aa35.19■■■■□ 3.22
BRF1-213ENST00000548421 PODXL2Q9NZ53 605 aa35.19■■■■□ 3.22
BRF1-213ENST00000548421 NSFL1CQ9UNZ2 370 aaKnown RBP35.19■■■■□ 3.22
BRF1-213ENST00000548421 ZNF804BA4D1E1 1349 aa35.18■■■■□ 3.22
BRF1-213ENST00000548421 GLRX3O76003 335 aaKnown RBP35.17■■■■□ 3.22
BRF1-213ENST00000548421 CCDC158Q5M9N0 1113 aa35.16■■■■□ 3.22
BRF1-213ENST00000548421 PIM2Q9P1W9 311 aa35.16■■■■□ 3.22
BRF1-213ENST00000548421 ATP2B4P23634 1241 aa35.16■■■■□ 3.22
BRF1-213ENST00000548421 BMP2KLQ5H9B9 411 aa35.16■■■■□ 3.22
BRF1-213ENST00000548421 PELP1Q8IZL8 1130 aaKnown RBP35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms