RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
PTCH1-216ENST00000548379 A0A1W2PP55 124 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 ZBTB42B2RXF5 422 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 PSAPP07602 524 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 EDN3P14138 238 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 PLAURQ03405 335 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
PTCH1-216ENST00000548379 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
PTCH1-216ENST00000548379 CEP120Q8N960 986 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 GLIS3Q8NEA6 775 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 SRCIN1Q9C0H9 1055 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
PTCH1-216ENST00000548379 PHF20L1A8MW92 1017 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 SIN3BO75182 1162 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 GPLD1P80108 840 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 TSNAXIP1Q2TAA8 658 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 PRPF40BQ6NWY9 871 aaKnown RBP6.78□□□□□ -1.32
PTCH1-216ENST00000548379 CRELD1Q96HD1 420 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 BCO2Q9BYV7 579 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 CNTNAP3Q9BZ76 1288 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 MRS2Q9HD23 443 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 LATS2Q9NRM7 1088 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
PTCH1-216ENST00000548379 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
PTCH1-216ENST00000548379 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
PTCH1-216ENST00000548379 HYAL2Q12891 473 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 NEUROD1Q13562 356 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 GRM2Q14416 872 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 TNFRSF25Q93038 417 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 VTI1BQ9UEU0 232 aa6.77□□□□□ -1.33
PTCH1-216ENST00000548379 NFKBIEO00221 500 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 ARAFP10398 606 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 MX2P20592 715 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 C3orf58Q8NDZ4 430 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 TCF12Q99081 682 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
PTCH1-216ENST00000548379 DZANK1Q9NVP4 752 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 PRR12Q9ULL5 1215 aa6.76□□□□□ -1.33
PTCH1-216ENST00000548379 USP31Q70CQ4 1352 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 ADARB2-AS1A8MUL3 147 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 BMP4P12644 408 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 SIK1P57059 783 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
PTCH1-216ENST00000548379 FANCCQ00597 558 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 PCSK7Q16549 785 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
PTCH1-216ENST00000548379 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 TMEM87AQ8NBN3 555 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 ZKSCAN3Q9BRR0 538 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 MBIPQ9NS73 344 aa6.75□□□□□ -1.33
PTCH1-216ENST00000548379 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
PTCH1-216ENST00000548379 TERTO14746 1132 aaKnown RBP6.74□□□□□ -1.33
PTCH1-216ENST00000548379 GADD45BO75293 160 aaPredicted RBP6.74□□□□□ -1.33
PTCH1-216ENST00000548379 USP17L7P0C7H9 530 aa6.74□□□□□ -1.33
PTCH1-216ENST00000548379 ACPPP15309 386 aa6.74□□□□□ -1.33
PTCH1-216ENST00000548379 MAP2K3P46734 347 aa6.74□□□□□ -1.33
PTCH1-216ENST00000548379 NCAPG2Q86XI2 1143 aa6.74□□□□□ -1.33
PTCH1-216ENST00000548379 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
PTCH1-216ENST00000548379 TRAK1Q9UPV9 953 aa6.74□□□□□ -1.33
PTCH1-216ENST00000548379 ADH6P28332 368 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
PTCH1-216ENST00000548379 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
PTCH1-216ENST00000548379 NFX1Q12986 1120 aaKnown RBP6.73□□□□□ -1.33
PTCH1-216ENST00000548379 RNFT1Q5M7Z0 435 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 FCHSD1Q86WN1 690 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
PTCH1-216ENST00000548379 NXPE3Q969Y0 559 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 NSUN5Q96P11 429 aaKnown RBP6.73□□□□□ -1.33
PTCH1-216ENST00000548379 OSMRQ99650 979 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 EHD4Q9H223 541 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
PTCH1-216ENST00000548379 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 GSTT1P30711 240 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
PTCH1-216ENST00000548379 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 COL25A1Q9BXS0 654 aaPredicted RBP6.72□□□□□ -1.33
PTCH1-216ENST00000548379 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 SLC6A14Q9UN76 642 aa6.72□□□□□ -1.33
PTCH1-216ENST00000548379 J3QW42 95 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 XRCC5P13010 732 aaKnown RBP6.71□□□□□ -1.34
PTCH1-216ENST00000548379 ITPKAP23677 461 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 ZNF76P36508 570 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 GRIA4P48058 902 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 KRT76Q01546 638 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 MLLT1Q03111 559 aaPredicted RBP6.71□□□□□ -1.34
PTCH1-216ENST00000548379 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
PTCH1-216ENST00000548379 MEI1Q5TIA1 1274 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
PTCH1-216ENST00000548379 UBE2OQ9C0C9 1292 aaKnown RBP6.71□□□□□ -1.34
PTCH1-216ENST00000548379 NAGPAQ9UK23 515 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms