RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 TTC39AQ5SRH9 613 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 HSCBQ8IWL3 235 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 XAGE2Q96GT9 111 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 TBC1D2Q9BYX2 928 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 AK9Q5TCS8 1911 aa9.46□□□□□ -0.9
TMEM106C-208ENST00000548355 LRP5O75197 1615 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 IFIT1P09914 478 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 ADORA1P30542 326 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 PUM3Q15397 648 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 VGLL2Q8N8G2 317 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 SNX21Q969T3 373 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 KIF2CQ99661 725 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 RAD50Q92878 1312 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 RFX7Q2KHR2 1363 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 CARMIL3Q8ND23 1372 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 C4AP0C0L4 1744 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
TMEM106C-208ENST00000548355 GOLIM4O00461 696 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 SLC5A1P13866 664 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 NFIXQ14938 502 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 TICAM2Q86XR7 235 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 ANKRD18AQ8IVF6 992 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 PROM2Q8N271 834 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 KBTBD3Q8NAB2 608 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 LPIN2Q92539 896 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 EDC3Q96F86 508 aaKnown RBP9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 IL25Q9H293 177 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 PAG1Q9NWQ8 432 aa9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 RGS17Q9UGC6 210 aaPredicted RBP9.44□□□□□ -0.9
TMEM106C-208ENST00000548355 ANAPC15P60006 121 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 LRRFIP1Q32MZ4 808 aaKnown RBP9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 C3orf67Q6ZVT6 689 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 FAM227BQ96M60 508 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 LSG1Q9H089 658 aaKnown RBP9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 NDUFB9Q9Y6M9 179 aa9.43□□□□□ -0.9
TMEM106C-208ENST00000548355 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 ST18O60284 1047 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 TAF5LO75529 589 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 GYS1P13807 737 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 FGFR2P21802 821 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 HSPA4P34932 840 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 FKBP4Q02790 459 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 CHRNDQ07001 517 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 ZNF512BQ96KM6 892 aaPredicted RBP9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 SNRKQ9NRH2 765 aa9.42□□□□□ -0.9
TMEM106C-208ENST00000548355 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 SPEF2Q9C093 1822 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 KCNJ4P48050 445 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 ST5P78524 1137 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
TMEM106C-208ENST00000548355 MED23Q9ULK4 1368 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 RNF113AO15541 343 aaKnown RBP9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 SERPINB2P05120 415 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 ZFYP08048 801 aaPredicted RBP9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 TM4SF1P30408 202 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 ZAP70P43403 619 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 PTH1RQ03431 593 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 SCARF1Q14162 830 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 ZNF827Q17R98 1081 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 MCMDC2Q4G0Z9 681 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 PRR5LQ6MZQ0 368 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 CELF1Q92879 486 aaKnown RBP9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 IL17RAQ96F46 866 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 HELLSQ9NRZ9 838 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
TMEM106C-208ENST00000548355 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 MCAMP43121 646 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 PHKA1P46020 1223 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 NEK4P51957 841 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 ZSCAN25Q6NSZ9 544 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 RPGRQ92834 1020 aaKnown RBP9.39□□□□□ -0.91
TMEM106C-208ENST00000548355 MAP4K1Q92918 833 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms