RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 RFC4P35249 363 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 C6orf132Q5T0Z8 1188 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 BEND3Q5T5X7 828 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 ZNF34Q8IZ26 560 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 BCL2L13Q9BXK5 485 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 STK32BQ9NY57 414 aa7.84□□□□□ -1.16
PTPRR-207ENST00000548220 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 USP42Q9H9J4 1324 aaKnown RBP7.83□□□□□ -1.16
PTPRR-207ENST00000548220 C4AP0C0L4 1744 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.83□□□□□ -1.16
PTPRR-207ENST00000548220 CAMK2BQ13554 666 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
PTPRR-207ENST00000548220 NYXQ9GZU5 481 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 ZBTB40Q9NUA8 1239 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 TFCP2L1Q9NZI6 479 aa7.83□□□□□ -1.16
PTPRR-207ENST00000548220 AFDNP55196 1824 aaKnown RBP7.83□□□□□ -1.16
PTPRR-207ENST00000548220 COL24A1Q17RW2 1714 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 NEURL1BA8MQ27 555 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 H7C1W4 665 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 RLBP1P12271 317 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 KCNC4Q03721 635 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
PTPRR-207ENST00000548220 GCKRQ14397 625 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 TTLL7Q6ZT98 887 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 SMIM5Q71RC9 77 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 PPP1R42Q7Z4L9 355 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 TMEM57Q8N5G2 664 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 CWC25Q9NXE8 425 aaPredicted RBP7.82□□□□□ -1.16
PTPRR-207ENST00000548220 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 RIC1Q4ADV7 1423 aa7.82□□□□□ -1.16
PTPRR-207ENST00000548220 TUBGCP6Q96RT7 1819 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 MYH3P11055 1940 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 GRM8O00222 908 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 TCERG1O14776 1098 aaKnown RBP7.81□□□□□ -1.16
PTPRR-207ENST00000548220 ANXA1P04083 346 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 PCCAP05165 728 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-207ENST00000548220 IGKV5-2P06315 115 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 TM4SF1P30408 202 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 SLC10A5Q5PT55 438 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 RPAP2Q8IXW5 612 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-207ENST00000548220 ZBTB38Q8NAP3 1195 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-207ENST00000548220 SETDB2Q96T68 719 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 PLA2G12BQ9BX93 195 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 C9orf78Q9NZ63 289 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-207ENST00000548220 TBC1D2BQ9UPU7 963 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 CDHR2Q9BYE9 1310 aa7.81□□□□□ -1.16
PTPRR-207ENST00000548220 F6X3S4 739 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 DPYSL4O14531 572 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 PLIN1O60240 522 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 GNAI2P04899 355 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 GYS1P13807 737 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 MTX1Q13505 466 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 SLC4A10Q6U841 1118 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 NLRP10Q86W26 655 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 ITPRIPQ8IWB1 547 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 PANK1Q8TE04 598 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 PDGFDQ9GZP0 370 aaPredicted RBP7.8□□□□□ -1.16
PTPRR-207ENST00000548220 WBP1LQ9NX94 342 aa7.8□□□□□ -1.16
PTPRR-207ENST00000548220 SEPT9Q9UHD8 586 aaPredicted RBP7.8□□□□□ -1.16
PTPRR-207ENST00000548220 CARMIL3Q8ND23 1372 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 RTL9Q8NET4 1388 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 PNPLA7Q6ZV29 1317 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 UBTFL1P0CB47 393 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 R3HDM1Q15032 1099 aaKnown RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 ZNF827Q17R98 1081 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 COL23A1Q86Y22 540 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 LRCH3Q96II8 777 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 MYD88Q99836 296 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 UTP14AQ9BVJ6 771 aaKnown RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
PTPRR-207ENST00000548220 LAMB2P55268 1798 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 NRXN2Q9P2S2 1712 aa7.79□□□□□ -1.16
PTPRR-207ENST00000548220 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 HMMRO75330 724 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 PIP4K2AP48426 406 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-207ENST00000548220 CASP7P55210 303 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 HDAC1Q13547 482 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-207ENST00000548220 HLFQ16534 295 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-207ENST00000548220 C20orf194Q5TEA3 1177 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPRR-207ENST00000548220 COG6Q9Y2V7 657 aa7.78□□□□□ -1.16
PTPRR-207ENST00000548220 KLRG2A4D1S0 409 aaPredicted RBP7.77□□□□□ -1.17
PTPRR-207ENST00000548220 CSF1RP07333 972 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 PACS2Q86VP3 889 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 ARXQ96QS3 562 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 TRMT112Q9UI30 125 aaKnown RBP7.77□□□□□ -1.17
PTPRR-207ENST00000548220 HPS5Q9UPZ3 1129 aa7.77□□□□□ -1.17
PTPRR-207ENST00000548220 ZNF330Q9Y3S2 320 aaPredicted RBP7.77□□□□□ -1.17
PTPRR-207ENST00000548220 CASZ1Q86V15 1759 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms