RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 PANK1Q8TE04 598 aa13.36□□□□□ -0.27
LETMD1-213ENST00000548209 FRAT1Q92837 279 aaPredicted RBP13.36□□□□□ -0.27
LETMD1-213ENST00000548209 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
LETMD1-213ENST00000548209 GPR25O00155 361 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 KCNQ3O43525 872 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 PRKAR2BP31323 418 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
LETMD1-213ENST00000548209 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-213ENST00000548209 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 COG6Q9Y2V7 657 aa13.35□□□□□ -0.27
LETMD1-213ENST00000548209 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
LETMD1-213ENST00000548209 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
LETMD1-213ENST00000548209 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
LETMD1-213ENST00000548209 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
LETMD1-213ENST00000548209 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
LETMD1-213ENST00000548209 KIAA2012Q0VF49 1180 aa13.34□□□□□ -0.27
LETMD1-213ENST00000548209 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
LETMD1-213ENST00000548209 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-213ENST00000548209 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-213ENST00000548209 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
LETMD1-213ENST00000548209 SCN9AQ15858 1988 aa13.33□□□□□ -0.28
LETMD1-213ENST00000548209 FKTNO75072 461 aa13.33□□□□□ -0.28
LETMD1-213ENST00000548209 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
LETMD1-213ENST00000548209 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
LETMD1-213ENST00000548209 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
LETMD1-213ENST00000548209 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
LETMD1-213ENST00000548209 PSME4Q14997 1843 aa13.33□□□□□ -0.28
LETMD1-213ENST00000548209 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
LETMD1-213ENST00000548209 YDJCA8MPS7 323 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 EGFRP00533 1210 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 RBM26Q5T8P6 1007 aaKnown RBP13.32□□□□□ -0.28
LETMD1-213ENST00000548209 NBPF10Q6P3W6 841 aaKnown RBP13.32□□□□□ -0.28
LETMD1-213ENST00000548209 DPF2Q92785 391 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 CDCA5Q96FF9 252 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 LRRC37AA6NMS7 1700 aa13.32□□□□□ -0.28
LETMD1-213ENST00000548209 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
LETMD1-213ENST00000548209 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
LETMD1-213ENST00000548209 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
LETMD1-213ENST00000548209 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
LETMD1-213ENST00000548209 MPNDQ8N594 471 aa13.31□□□□□ -0.28
LETMD1-213ENST00000548209 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
LETMD1-213ENST00000548209 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
LETMD1-213ENST00000548209 DUOX1Q9NRD9 1551 aa13.31□□□□□ -0.28
LETMD1-213ENST00000548209 IGHDP01880 384 aa13.3□□□□□ -0.28
LETMD1-213ENST00000548209 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
LETMD1-213ENST00000548209 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
LETMD1-213ENST00000548209 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-213ENST00000548209 ABCC4O15439 1325 aa13.3□□□□□ -0.28
LETMD1-213ENST00000548209 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
LETMD1-213ENST00000548209 PSMD14O00487 310 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
LETMD1-213ENST00000548209 RLBP1P12271 317 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
LETMD1-213ENST00000548209 GPTP24298 496 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 GNAI1P63096 354 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 FKBP1BP68106 108 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 TRIM17Q9Y577 477 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 LAMB1P07942 1786 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
LETMD1-213ENST00000548209 TM4SF4P48230 202 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 SUSD4Q5VX71 490 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 SP8Q8IXZ3 490 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 FTSJ3Q8IY81 847 aaKnown RBP13.28□□□□□ -0.28
LETMD1-213ENST00000548209 SSH1Q8WYL5 1049 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
LETMD1-213ENST00000548209 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
LETMD1-213ENST00000548209 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 RPS12P25398 132 aaKnown RBP13.27□□□□□ -0.29
LETMD1-213ENST00000548209 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
LETMD1-213ENST00000548209 ASTN2O75129 1339 aaPredicted RBP13.26□□□□□ -0.29
LETMD1-213ENST00000548209 NTSR2O95665 410 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 RGS3P49796 1198 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 KIF6Q6ZMV9 814 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 OTOP1Q7RTM1 612 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 DBNDD1Q9H9R9 158 aa13.26□□□□□ -0.29
LETMD1-213ENST00000548209 RANBP2P49792 3224 aaKnown RBP13.26□□□□□ -0.29
LETMD1-213ENST00000548209 H0YGN5 161 aa13.25□□□□□ -0.29
LETMD1-213ENST00000548209 UBE2Q2LH0YL09 131 aa13.25□□□□□ -0.29
LETMD1-213ENST00000548209 BBOX1O75936 387 aa13.25□□□□□ -0.29
LETMD1-213ENST00000548209 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
LETMD1-213ENST00000548209 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms