RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 SGSM2O43147 1006 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 PDE8BO95263 885 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 ATP2B3Q16720 1220 aa16.55■□□□□ 0.24
SMPDL3B-205ENST00000548116 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
SMPDL3B-205ENST00000548116 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
SMPDL3B-205ENST00000548116 SLC4A3P48751 1232 aa16.54■□□□□ 0.24
SMPDL3B-205ENST00000548116 TAF1P21675 1872 aa16.54■□□□□ 0.24
SMPDL3B-205ENST00000548116 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 MPHOSPH8Q99549 860 aa16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 FGFR2P21802 821 aa16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 CWC27Q6UX04 472 aaKnown RBP16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
SMPDL3B-205ENST00000548116 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.24
SMPDL3B-205ENST00000548116 TM4SF1P30408 202 aa16.52■□□□□ 0.23
SMPDL3B-205ENST00000548116 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.23
SMPDL3B-205ENST00000548116 DNAJC2Q99543 621 aaKnown RBP16.52■□□□□ 0.23
SMPDL3B-205ENST00000548116 FSD1Q9BTV5 496 aa16.52■□□□□ 0.23
SMPDL3B-205ENST00000548116 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 ANO2Q9NQ90 1003 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 FAM227BQ96M60 508 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 TFCP2L1Q9NZI6 479 aa16.51■□□□□ 0.23
SMPDL3B-205ENST00000548116 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 HIP1O00291 1037 aa16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 EPB41L2O43491 1005 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
SMPDL3B-205ENST00000548116 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 SNAP23O00161 211 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 TAF5LO75529 589 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 SCARF1Q14162 830 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 CNBD1Q8NA66 436 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 LPIN2Q92539 896 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 A0A0D9SFI3 127 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 GOLIM4O00461 696 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 CHRNDQ07001 517 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 DDR1Q08345 913 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 BECN1Q14457 450 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 COL23A1Q86Y22 540 aaPredicted RBP16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
SMPDL3B-205ENST00000548116 RAD50Q92878 1312 aa16.48■□□□□ 0.23
SMPDL3B-205ENST00000548116 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3B-205ENST00000548116 CHGBP05060 677 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 SERPINB2P05120 415 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 SNX21Q969T3 373 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 MED23Q9ULK4 1368 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 CAMKK2Q96RR4 588 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
SMPDL3B-205ENST00000548116 SLC5A1P13866 664 aa16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 MCAMP43121 646 aa16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 PHKA1P46020 1223 aa16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 PTH1RQ03431 593 aa16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 DAXXQ9UER7 740 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 MINPP1Q9UNW1 487 aa16.46■□□□□ 0.23
SMPDL3B-205ENST00000548116 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.22
SMPDL3B-205ENST00000548116 NPHP1O15259 732 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 ARID4AP29374 1257 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 HSPA4P34932 840 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 RABEP1Q15276 862 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 EZH2Q15910 746 aaKnown RBP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 TICAM2Q86XR7 235 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 ZAP70P43403 619 aa16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 EN1Q05925 392 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-205ENST00000548116 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3B-205ENST00000548116 MCCP23508 829 aa16.44■□□□□ 0.22
SMPDL3B-205ENST00000548116 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
SMPDL3B-205ENST00000548116 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
SMPDL3B-205ENST00000548116 CCDC171Q6TFL3 1326 aa16.44■□□□□ 0.22
SMPDL3B-205ENST00000548116 ANAPC15P60006 121 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms