RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 EIF6P56537 245 aaKnown RBP23.59■■□□□ 1.37
PRPF40B-206ENST00000547764 C1QTNF8P60827 252 aa23.59■■□□□ 1.37
PRPF40B-206ENST00000547764 MPHOSPH8Q99549 860 aa23.59■■□□□ 1.37
PRPF40B-206ENST00000547764 GGA1Q9UJY5 639 aa23.59■■□□□ 1.37
PRPF40B-206ENST00000547764 XDHP47989 1333 aa23.59■■□□□ 1.37
PRPF40B-206ENST00000547764 RIMBP2O15034 1052 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 UFL1O94874 794 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 TRIM27P14373 513 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 ATF7IPQ6VMQ6 1270 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 EYA3Q99504 573 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 BICC1Q9H694 974 aaKnown RBP23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 ZNRF3Q9ULT6 936 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 SPEF2Q9C093 1822 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 WDR90Q96KV7 1748 aa23.58■■□□□ 1.37
PRPF40B-206ENST00000547764 CCDC57Q2TAC2 916 aa23.57■■□□□ 1.36
PRPF40B-206ENST00000547764 TNNQ9UQP3 1299 aa23.57■■□□□ 1.36
PRPF40B-206ENST00000547764 TOMM70O94826 608 aa23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 RABL6Q3YEC7 729 aaPredicted RBP23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 INTS3Q68E01 1043 aaKnown RBP23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 GPC2Q8N158 579 aa23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 ANKRD44Q8N8A2 993 aa23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 L3MBTL3Q96JM7 780 aaPredicted RBP23.56■■□□□ 1.36
PRPF40B-206ENST00000547764 ATP2B4P23634 1241 aa23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 C16orf71Q8IYS4 520 aaPredicted RBP23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 ZNF594Q96JF6 807 aaPredicted RBP23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 ZC3H12CQ9C0D7 883 aaKnown RBP23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 GJA3Q9Y6H8 435 aa23.55■■□□□ 1.36
PRPF40B-206ENST00000547764 WTIPA6NIX2 430 aaPredicted RBP23.54■■□□□ 1.36
PRPF40B-206ENST00000547764 CXCL9Q07325 125 aa23.54■■□□□ 1.36
PRPF40B-206ENST00000547764 CLUAP1Q96AJ1 413 aa23.54■■□□□ 1.36
PRPF40B-206ENST00000547764 YDJCA8MPS7 323 aa23.53■■□□□ 1.36
PRPF40B-206ENST00000547764 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
PRPF40B-206ENST00000547764 TAF7LQ5H9L4 462 aa23.53■■□□□ 1.36
PRPF40B-206ENST00000547764 ANKRD2Q9GZV1 360 aa23.53■■□□□ 1.36
PRPF40B-206ENST00000547764 DBNDD1Q9H9R9 158 aa23.53■■□□□ 1.36
PRPF40B-206ENST00000547764 CHRNDQ07001 517 aa23.52■■□□□ 1.36
PRPF40B-206ENST00000547764 DOK7Q18PE1 504 aa23.52■■□□□ 1.36
PRPF40B-206ENST00000547764 LDHAL6AQ6ZMR3 332 aa23.52■■□□□ 1.36
PRPF40B-206ENST00000547764 IQCA1LA6NCM1 817 aa23.51■■□□□ 1.35
PRPF40B-206ENST00000547764 RAD17O75943 681 aa23.51■■□□□ 1.35
PRPF40B-206ENST00000547764 RBM46Q8TBY0 533 aaKnown RBP23.51■■□□□ 1.35
PRPF40B-206ENST00000547764 MEIS3Q99687 375 aa23.51■■□□□ 1.35
PRPF40B-206ENST00000547764 LEMD3Q9Y2U8 911 aa23.51■■□□□ 1.35
PRPF40B-206ENST00000547764 ECE2O60344 883 aa23.5■■□□□ 1.35
PRPF40B-206ENST00000547764 CIAPIN1Q6FI81 312 aa23.5■■□□□ 1.35
PRPF40B-206ENST00000547764 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
PRPF40B-206ENST00000547764 TAF1DQ9H5J8 278 aaPredicted RBP23.49■■□□□ 1.35
PRPF40B-206ENST00000547764 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
PRPF40B-206ENST00000547764 HACL1Q9UJ83 578 aa23.49■■□□□ 1.35
PRPF40B-206ENST00000547764 SCN4AP35499 1836 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 G3V3G9 751 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 TAF5LO75529 589 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 TNIP1Q15025 636 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 DCAF8Q5TAQ9 597 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 TMEM57Q8N5G2 664 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 PUS3Q9BZE2 481 aaKnown RBP23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 KCNQ5Q9NR82 932 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 HDAC5Q9UQL6 1122 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 LRRFIP2Q9Y608 721 aaKnown RBP23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 ZNF804BA4D1E1 1349 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 MED23Q9ULK4 1368 aa23.48■■□□□ 1.35
PRPF40B-206ENST00000547764 SCNN1DP51172 638 aa23.47■■□□□ 1.35
PRPF40B-206ENST00000547764 SNAP23O00161 211 aa23.46■■□□□ 1.35
PRPF40B-206ENST00000547764 GNAI3P08754 354 aa23.46■■□□□ 1.35
PRPF40B-206ENST00000547764 EPHX2P34913 555 aa23.46■■□□□ 1.35
PRPF40B-206ENST00000547764 KCNJ4P48050 445 aa23.46■■□□□ 1.35
PRPF40B-206ENST00000547764 TXNRD3Q86VQ6 643 aa23.46■■□□□ 1.35
PRPF40B-206ENST00000547764 PSMD14O00487 310 aa23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 LMOD1P29536 600 aaPredicted RBP23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 GMPSP49915 693 aaPredicted RBP23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 FTSJ3Q8IY81 847 aaKnown RBP23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 RIPOR2Q9Y4F9 1068 aa23.45■■□□□ 1.34
PRPF40B-206ENST00000547764 PLIN1O60240 522 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 POTEIP0CG38 1075 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 RLBP1P12271 317 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 KLRK1P26718 216 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 EPS15P42566 896 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 RFX5P48382 616 aaPredicted RBP23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 FSTL1Q12841 308 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 SMC1BQ8NDV3 1235 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
PRPF40B-206ENST00000547764 LRRC24Q50LG9 513 aa23.43■■□□□ 1.34
PRPF40B-206ENST00000547764 PODNQ7Z5L7 613 aa23.43■■□□□ 1.34
PRPF40B-206ENST00000547764 GPRC5DQ9NZD1 345 aa23.43■■□□□ 1.34
PRPF40B-206ENST00000547764 A0A1B0GUL6 1792 aa23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 SCN9AQ15858 1988 aa23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 EAPPQ56P03 285 aaPredicted RBP23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 ZBTB12Q9Y330 459 aaPredicted RBP23.42■■□□□ 1.34
PRPF40B-206ENST00000547764 MROH5Q6ZUA9 1318 aa23.41■■□□□ 1.34
PRPF40B-206ENST00000547764 IRS2Q9Y4H2 1338 aa23.41■■□□□ 1.34
PRPF40B-206ENST00000547764 PTPN12Q05209 780 aaKnown RBP23.41■■□□□ 1.34
PRPF40B-206ENST00000547764 COA1Q9GZY4 146 aa23.41■■□□□ 1.34
PRPF40B-206ENST00000547764 VIL1P09327 827 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms