RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 FOXO4P98177 505 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
LETMD1-209ENST00000547318 LEO1Q8WVC0 666 aaPredicted RBP17.26■□□□□ 0.35
LETMD1-209ENST00000547318 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 TNMDQ9H2S6 317 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-209ENST00000547318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-209ENST00000547318 MYH15Q9Y2K3 1946 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 CTAGE5O15320 804 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 RESTQ13127 1097 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 Q6ZUG5 572 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
LETMD1-209ENST00000547318 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 H3BQV1 296 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 UQCRHP07919 91 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 CYP21A2P08686 494 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 TYRO3Q06418 890 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.358e-7■■■□□ 17.6
LETMD1-209ENST00000547318 ZMYM1Q5SVZ6 1142 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
LETMD1-209ENST00000547318 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
LETMD1-209ENST00000547318 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
LETMD1-209ENST00000547318 WDR17Q8IZU2 1322 aa17.23■□□□□ 0.35
LETMD1-209ENST00000547318 LAMA4Q16363 1823 aa17.23■□□□□ 0.35
LETMD1-209ENST00000547318 EYA2O00167 538 aa17.23■□□□□ 0.35
LETMD1-209ENST00000547318 ZFYP08048 801 aaPredicted RBP17.23■□□□□ 0.35
LETMD1-209ENST00000547318 ATG9AQ7Z3C6 839 aa17.23■□□□□ 0.35
LETMD1-209ENST00000547318 ZNF274Q96GC6 653 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-209ENST00000547318 FGD1P98174 961 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 FERMT3Q86UX7 667 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 MYRIPQ8NFW9 859 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 BRF1Q92994 677 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 STRCP1A6NGW2 1772 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
LETMD1-209ENST00000547318 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
LETMD1-209ENST00000547318 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
LETMD1-209ENST00000547318 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
LETMD1-209ENST00000547318 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
LETMD1-209ENST00000547318 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-209ENST00000547318 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 LIG1P18858 919 aa17.2■□□□□ 0.34
LETMD1-209ENST00000547318 GTF2F1P35269 517 aaKnown RBP eCLIP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
LETMD1-209ENST00000547318 EVCP57679 992 aa17.2■□□□□ 0.34
LETMD1-209ENST00000547318 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
LETMD1-209ENST00000547318 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
LETMD1-209ENST00000547318 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
LETMD1-209ENST00000547318 SCRN1Q12765 414 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 STK3Q13188 491 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
LETMD1-209ENST00000547318 NBPF14Q5TI25 921 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
LETMD1-209ENST00000547318 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 TCEANC2Q96MN5 208 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-209ENST00000547318 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 WDR19Q8NEZ3 1342 aa17.19■□□□□ 0.34
LETMD1-209ENST00000547318 CDC25BP30305 580 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 GOLIM4O00461 696 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
LETMD1-209ENST00000547318 COL5A2P05997 1499 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-209ENST00000547318 HSPD1P10809 573 aaKnown RBP17.17■□□□□ 0.34
LETMD1-209ENST00000547318 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-209ENST00000547318 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
LETMD1-209ENST00000547318 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
LETMD1-209ENST00000547318 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
LETMD1-209ENST00000547318 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
LETMD1-209ENST00000547318 SHANK3Q9BYB0 1731 aa17.17■□□□□ 0.34
LETMD1-209ENST00000547318 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
LETMD1-209ENST00000547318 JAK2O60674 1132 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-209ENST00000547318 A0A1B0GUL7 405 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 E7EWF7 191 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 CHRNA2Q15822 529 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 PGBD1Q96JS3 809 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
LETMD1-209ENST00000547318 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
LETMD1-209ENST00000547318 TFIP11Q9UBB9 837 aaKnown RBP17.16■□□□□ 0.34
LETMD1-209ENST00000547318 MAST3O60307 1309 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms