RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TGFB2P61812 414 aa19.48■□□□□ 0.71
TRAFD1-203ENST00000547063 TFCP2Q12800 502 aa19.48■□□□□ 0.71
TRAFD1-203ENST00000547063 CNKSR1Q969H4 720 aa19.48■□□□□ 0.71
TRAFD1-203ENST00000547063 ANKRD2Q9GZV1 360 aa19.48■□□□□ 0.71
TRAFD1-203ENST00000547063 SPEF2Q9C093 1822 aa19.48■□□□□ 0.71
TRAFD1-203ENST00000547063 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
TRAFD1-203ENST00000547063 PTGER2P43116 358 aa19.47■□□□□ 0.71
TRAFD1-203ENST00000547063 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
TRAFD1-203ENST00000547063 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
TRAFD1-203ENST00000547063 CD2APQ9Y5K6 639 aa19.47■□□□□ 0.71
TRAFD1-203ENST00000547063 TAF1P21675 1872 aa19.46■□□□□ 0.71
TRAFD1-203ENST00000547063 COL11A2P13942 1736 aaPredicted RBP19.46■□□□□ 0.71
TRAFD1-203ENST00000547063 PDE8BO95263 885 aa19.46■□□□□ 0.71
TRAFD1-203ENST00000547063 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
TRAFD1-203ENST00000547063 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.712e-7■■□□□ 11.8
TRAFD1-203ENST00000547063 CHRNDQ07001 517 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 TNNI3KQ59H18 835 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 AACSQ86V21 672 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 GPATCH3Q96I76 525 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 MINPP1Q9UNW1 487 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 FPGT-TNNI3KV9GXZ4 949 aa19.45■□□□□ 0.7
TRAFD1-203ENST00000547063 DLEC1Q9Y238 1755 aa19.44■□□□□ 0.7
TRAFD1-203ENST00000547063 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
TRAFD1-203ENST00000547063 PUM3Q15397 648 aaKnown RBP19.44■□□□□ 0.7
TRAFD1-203ENST00000547063 ATP2B3Q16720 1220 aa19.43■□□□□ 0.7
TRAFD1-203ENST00000547063 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
TRAFD1-203ENST00000547063 VGLL2Q8N8G2 317 aa19.43■□□□□ 0.7
TRAFD1-203ENST00000547063 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
TRAFD1-203ENST00000547063 ZNF609O15014 1411 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 MX1P20591 662 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 PDE4AP27815 886 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 CHRNA5P30532 468 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 RGS3P49796 1198 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 UBE4AQ14139 1066 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 LPIN2Q92539 896 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 EAF2Q96CJ1 260 aaPredicted RBP19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 AOX1Q06278 1338 aa19.42■□□□□ 0.7
TRAFD1-203ENST00000547063 COL4A1P02462 1669 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 A0A1B0GUL7 405 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 IFIT1P09914 478 aaKnown RBP19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 SLC5A1P13866 664 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 TTLL6Q8N841 843 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 NEUROD6Q96NK8 337 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 ANKIB1Q9P2G1 1089 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 PPP1R1BQ9UD71 204 aaPredicted RBP19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 STAP2Q9UGK3 403 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 XDHP47989 1333 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
TRAFD1-203ENST00000547063 ERC2O15083 957 aa19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 DPEP1P16444 411 aa19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 KCNJ4P48050 445 aa19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 PRPF40BQ6NWY9 871 aaKnown RBP19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 HELBQ8NG08 1087 aaPredicted RBP19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 OSBPL3Q9H4L5 887 aa19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 LEMD3Q9Y2U8 911 aa19.4■□□□□ 0.7
TRAFD1-203ENST00000547063 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.7
TRAFD1-203ENST00000547063 A0A1B0GUL6 1792 aa19.39■□□□□ 0.7
TRAFD1-203ENST00000547063 TAF5LO75529 589 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 PDE1AP54750 535 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 GORABQ5T7V8 394 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 CCDC8Q9H0W5 538 aaPredicted RBP19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 PIM2Q9P1W9 311 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 SALL3Q9BXA9 1300 aa19.39■□□□□ 0.69
TRAFD1-203ENST00000547063 A0A0G2JLW4 131 aa19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 FGFR2P21802 821 aa19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 TIMM10P62072 90 aa19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 CCDC158Q5M9N0 1113 aa19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.38■□□□□ 0.69
TRAFD1-203ENST00000547063 CACNA1SQ13698 1873 aa19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 ATP2B4P23634 1241 aa19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 DBNLQ9UJU6 430 aaKnown RBP19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 ARAP2Q8WZ64 1704 aa19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
TRAFD1-203ENST00000547063 ZNF804BA4D1E1 1349 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 KCNA3P22001 575 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 OTUD7AQ8TE49 926 aaPredicted RBP19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 XAGE2Q96GT9 111 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 DBNDD2Q9BQY9 259 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 GGA1Q9UJY5 639 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 SLX4Q8IY92 1834 aa19.36■□□□□ 0.69
TRAFD1-203ENST00000547063 GPSM2P81274 684 aa19.35■□□□□ 0.69
TRAFD1-203ENST00000547063 CAVIN4Q5BKX8 364 aa19.35■□□□□ 0.69
TRAFD1-203ENST00000547063 MPNDQ8N594 471 aa19.35■□□□□ 0.69
TRAFD1-203ENST00000547063 ATP5JP18859 108 aa19.34■□□□□ 0.69
TRAFD1-203ENST00000547063 DALRD3Q5D0E6 543 aaKnown RBP19.34■□□□□ 0.69
TRAFD1-203ENST00000547063 DPP8Q6V1X1 898 aaPredicted RBP19.34■□□□□ 0.69
TRAFD1-203ENST00000547063 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
TRAFD1-203ENST00000547063 TLR7Q9NYK1 1049 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms