RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 LARGE2Q8N3Y3 721 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 TBC1D16Q8TBP0 767 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 ZNF594Q96JF6 807 aaPredicted RBP21.01■□□□□ 0.95
CCDC38-203ENST00000546803 EYA3Q99504 573 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 CNNM1Q9NRU3 951 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 PPIP5K2O43314 1243 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 KIAA2012Q0VF49 1180 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 MTX1Q13505 466 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 POLLQ9UGP5 575 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 FER1L6Q2WGJ9 1857 aa21■□□□□ 0.95
CCDC38-203ENST00000546803 UFL1O94874 794 aa20.99■□□□□ 0.95
CCDC38-203ENST00000546803 CHRNDQ07001 517 aa20.99■□□□□ 0.95
CCDC38-203ENST00000546803 WASHC4Q2M389 1173 aa20.99■□□□□ 0.95
CCDC38-203ENST00000546803 LEMD3Q9Y2U8 911 aa20.99■□□□□ 0.95
CCDC38-203ENST00000546803 COG6Q9Y2V7 657 aa20.99■□□□□ 0.95
CCDC38-203ENST00000546803 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
CCDC38-203ENST00000546803 RFX5P48382 616 aaPredicted RBP20.98■□□□□ 0.95
CCDC38-203ENST00000546803 RRP1P56182 461 aaKnown RBP20.98■□□□□ 0.95
CCDC38-203ENST00000546803 AOC3Q16853 763 aa20.98■□□□□ 0.95
CCDC38-203ENST00000546803 NIM1KQ8IY84 436 aa20.98■□□□□ 0.95
CCDC38-203ENST00000546803 LRRC37AA6NMS7 1700 aa20.98■□□□□ 0.95
CCDC38-203ENST00000546803 MYH3P11055 1940 aa20.98■□□□□ 0.95
CCDC38-203ENST00000546803 ZC3H12CQ9C0D7 883 aaKnown RBP20.97■□□□□ 0.95
CCDC38-203ENST00000546803 FBXO3Q9UK99 471 aa20.97■□□□□ 0.95
CCDC38-203ENST00000546803 RIPOR2Q9Y4F9 1068 aa20.97■□□□□ 0.95
CCDC38-203ENST00000546803 FZD9O00144 591 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 PTPN12Q05209 780 aaKnown RBP20.96■□□□□ 0.95
CCDC38-203ENST00000546803 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 DPY19L2Q6NUT2 758 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 MROH5Q6ZUA9 1318 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
CCDC38-203ENST00000546803 CHD4Q14839 1912 aa20.96■□□□□ 0.95
CCDC38-203ENST00000546803 TAF1P21675 1872 aa20.95■□□□□ 0.94
CCDC38-203ENST00000546803 ZNF784Q8NCA9 323 aaPredicted RBP20.95■□□□□ 0.94
CCDC38-203ENST00000546803 KLHDC4Q8TBB5 520 aa20.95■□□□□ 0.94
CCDC38-203ENST00000546803 PUS3Q9BZE2 481 aaKnown RBP20.95■□□□□ 0.94
CCDC38-203ENST00000546803 COPRSQ9NQ92 184 aa20.95■□□□□ 0.94
CCDC38-203ENST00000546803 DUOX1Q9NRD9 1551 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 GLTPD2A6NH11 291 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 EYA2O00167 538 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 KCNJ4P48050 445 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 EIF6P56537 245 aaKnown RBP20.94■□□□□ 0.94
CCDC38-203ENST00000546803 ZNRF3Q9ULT6 936 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 ZNF804BA4D1E1 1349 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 KDM2BQ8NHM5 1336 aa20.94■□□□□ 0.94
CCDC38-203ENST00000546803 RIMBP2O15034 1052 aa20.93■□□□□ 0.94
CCDC38-203ENST00000546803 CIAO1O76071 339 aa20.93■□□□□ 0.94
CCDC38-203ENST00000546803 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
CCDC38-203ENST00000546803 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
CCDC38-203ENST00000546803 HELBQ8NG08 1087 aaPredicted RBP20.93■□□□□ 0.94
CCDC38-203ENST00000546803 ZBTB40Q9NUA8 1239 aa20.93■□□□□ 0.94
CCDC38-203ENST00000546803 TAF5LO75529 589 aa20.92■□□□□ 0.94
CCDC38-203ENST00000546803 METTL24Q5JXM2 366 aa20.92■□□□□ 0.94
CCDC38-203ENST00000546803 GPR101Q96P66 508 aaPredicted RBP20.92■□□□□ 0.94
CCDC38-203ENST00000546803 C1orf115Q9H7X2 142 aa20.92■□□□□ 0.94
CCDC38-203ENST00000546803 MED23Q9ULK4 1368 aa20.92■□□□□ 0.94
CCDC38-203ENST00000546803 PNMA6EA0A0J9YXQ4 647 aa20.91■□□□□ 0.94
CCDC38-203ENST00000546803 G3V3G9 751 aa20.91■□□□□ 0.94
CCDC38-203ENST00000546803 UBE4AQ14139 1066 aa20.91■□□□□ 0.94
CCDC38-203ENST00000546803 DCAF8Q5TAQ9 597 aa20.91■□□□□ 0.94
CCDC38-203ENST00000546803 C15orf52Q6ZUT6 534 aaKnown RBP20.91■□□□□ 0.94
CCDC38-203ENST00000546803 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
CCDC38-203ENST00000546803 UTRNP46939 3433 aa20.9■□□□□ 0.94
CCDC38-203ENST00000546803 WTIPA6NIX2 430 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-203ENST00000546803 IL15P40933 162 aaPredicted RBP20.9■□□□□ 0.94
CCDC38-203ENST00000546803 POLA2Q14181 598 aa20.9■□□□□ 0.94
CCDC38-203ENST00000546803 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
CCDC38-203ENST00000546803 PA2G4Q9UQ80 394 aaKnown RBP20.9■□□□□ 0.94
CCDC38-203ENST00000546803 SBF1O95248 1867 aa20.9■□□□□ 0.94
CCDC38-203ENST00000546803 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
CCDC38-203ENST00000546803 PDE8BO95263 885 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 DOK7Q18PE1 504 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 ATG9AQ7Z3C6 839 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.93
CCDC38-203ENST00000546803 SIL1Q9H173 461 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 DBNDD1Q9H9R9 158 aa20.89■□□□□ 0.93
CCDC38-203ENST00000546803 ZNF541Q9H0D2 1346 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 ECE2O60344 883 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 PODNQ7Z5L7 613 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
CCDC38-203ENST00000546803 GPC2Q8N158 579 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 VGLL2Q8N8G2 317 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 COA1Q9GZY4 146 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 CEP126Q9P2H0 1117 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 COL4A5P29400 1685 aa20.88■□□□□ 0.93
CCDC38-203ENST00000546803 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
CCDC38-203ENST00000546803 SNAP23O00161 211 aa20.87■□□□□ 0.93
CCDC38-203ENST00000546803 DDNO94850 711 aaPredicted RBP20.87■□□□□ 0.93
CCDC38-203ENST00000546803 CXCL9Q07325 125 aa20.87■□□□□ 0.93
CCDC38-203ENST00000546803 TNIP1Q15025 636 aa20.87■□□□□ 0.93
CCDC38-203ENST00000546803 CIAPIN1Q6FI81 312 aa20.87■□□□□ 0.93
CCDC38-203ENST00000546803 PUM3Q15397 648 aaKnown RBP20.86■□□□□ 0.93
CCDC38-203ENST00000546803 TXNRD3Q86VQ6 643 aa20.86■□□□□ 0.93
CCDC38-203ENST00000546803 L3MBTL3Q96JM7 780 aaPredicted RBP20.86■□□□□ 0.93
CCDC38-203ENST00000546803 IRS2Q9Y4H2 1338 aa20.85■□□□□ 0.93
CCDC38-203ENST00000546803 KLRK1P26718 216 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms