RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
VDR-203ENST00000546653 PSME4Q14997 1843 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 FKTNO75072 461 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 VIL1P09327 827 aaKnown RBP17.66■□□□□ 0.42
VDR-203ENST00000546653 SCARF1Q14162 830 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 PDIA6Q15084 440 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
VDR-203ENST00000546653 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
VDR-203ENST00000546653 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
VDR-203ENST00000546653 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
VDR-203ENST00000546653 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
VDR-203ENST00000546653 CFHR5Q9BXR6 569 aa17.65■□□□□ 0.42
VDR-203ENST00000546653 SCAF8Q9UPN6 1271 aaKnown RBP17.65■□□□□ 0.42
VDR-203ENST00000546653 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
VDR-203ENST00000546653 GPSM2P81274 684 aa17.64■□□□□ 0.41
VDR-203ENST00000546653 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
VDR-203ENST00000546653 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.41
VDR-203ENST00000546653 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
VDR-203ENST00000546653 COL6A3P12111 3177 aa17.63■□□□□ 0.41
VDR-203ENST00000546653 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
VDR-203ENST00000546653 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
VDR-203ENST00000546653 COLQQ9Y215 455 aaPredicted RBP17.63■□□□□ 0.41
VDR-203ENST00000546653 ZNF609O15014 1411 aa17.63■□□□□ 0.41
VDR-203ENST00000546653 ANXA1P04083 346 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 MKRN3Q13064 507 aaKnown RBP17.62■□□□□ 0.41
VDR-203ENST00000546653 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
VDR-203ENST00000546653 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
VDR-203ENST00000546653 PITPNM2Q9BZ72 1349 aa17.61■□□□□ 0.41
VDR-203ENST00000546653 OTOP1Q7RTM1 612 aa17.6■□□□□ 0.41
VDR-203ENST00000546653 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
VDR-203ENST00000546653 EYA3Q99504 573 aa17.6■□□□□ 0.41
VDR-203ENST00000546653 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
VDR-203ENST00000546653 SREBF2Q12772 1141 aa17.59■□□□□ 0.41
VDR-203ENST00000546653 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
VDR-203ENST00000546653 RSBN1LQ6PCB5 846 aaPredicted RBP17.59■□□□□ 0.41
VDR-203ENST00000546653 AGBL3Q8NEM8 1001 aa17.59■□□□□ 0.41
VDR-203ENST00000546653 GMLQ99445 158 aa17.59■□□□□ 0.41
VDR-203ENST00000546653 TRIM17Q9Y577 477 aa17.59■□□□□ 0.41
VDR-203ENST00000546653 TCIRG1Q13488 830 aa17.58■□□□□ 0.4
VDR-203ENST00000546653 SF3B3Q15393 1217 aaKnown RBP17.58■□□□□ 0.4
VDR-203ENST00000546653 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.4
VDR-203ENST00000546653 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
VDR-203ENST00000546653 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
VDR-203ENST00000546653 PTPN12Q05209 780 aaKnown RBP17.56■□□□□ 0.4
VDR-203ENST00000546653 TTLL12Q14166 644 aaPredicted RBP17.56■□□□□ 0.4
VDR-203ENST00000546653 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
VDR-203ENST00000546653 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
VDR-203ENST00000546653 LAMB1P07942 1786 aa17.56■□□□□ 0.4
VDR-203ENST00000546653 DLL1O00548 723 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 USP17L8P0C7I0 530 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 AIMP1Q12904 312 aaKnown RBP17.55■□□□□ 0.4
VDR-203ENST00000546653 NBPF9Q3BBW0 867 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 PTPN22Q9Y2R2 807 aa17.55■□□□□ 0.4
VDR-203ENST00000546653 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
VDR-203ENST00000546653 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
VDR-203ENST00000546653 ALDH1A1P00352 501 aa17.53■□□□□ 0.4
VDR-203ENST00000546653 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
VDR-203ENST00000546653 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
VDR-203ENST00000546653 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
VDR-203ENST00000546653 LAMA3Q16787 3333 aa17.52■□□□□ 0.4
VDR-203ENST00000546653 UFL1O94874 794 aa17.52■□□□□ 0.4
VDR-203ENST00000546653 CAP1Q01518 475 aa17.52■□□□□ 0.4
VDR-203ENST00000546653 LDLRAD1Q5T700 205 aa17.52■□□□□ 0.4
VDR-203ENST00000546653 IFNL1Q8IU54 200 aa17.52■□□□□ 0.4
VDR-203ENST00000546653 G3V3G9 751 aa17.51■□□□□ 0.39
VDR-203ENST00000546653 PRKG1Q13976 671 aa17.51■□□□□ 0.39
VDR-203ENST00000546653 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
VDR-203ENST00000546653 H0YGN5 161 aa17.5■□□□□ 0.39
VDR-203ENST00000546653 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
VDR-203ENST00000546653 CD99L2Q8TCZ2 262 aa17.5■□□□□ 0.39
VDR-203ENST00000546653 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
VDR-203ENST00000546653 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
VDR-203ENST00000546653 TSPYL4Q9UJ04 414 aa17.5■□□□□ 0.39
VDR-203ENST00000546653 WNT10BO00744 389 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 NF2P35240 595 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 NFE2L2Q16236 605 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
VDR-203ENST00000546653 SEC31BQ9NQW1 1179 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 FZD1Q9UP38 647 aa17.49■□□□□ 0.39
VDR-203ENST00000546653 USP17L3A6NCW0 530 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 USP17L4A6NCW7 530 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 MANSC4A6NHS7 340 aaPredicted RBP17.48■□□□□ 0.39
VDR-203ENST00000546653 USP17L1Q7RTZ2 530 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 ERO1AQ96HE7 468 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 ZNF333Q96JL9 665 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
VDR-203ENST00000546653 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms