RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 BRCA2P51587 3418 aa14.33□□□□□ -0.12
TMEM116-203ENST00000546537 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.12
TMEM116-203ENST00000546537 SZT2Q5T011 3432 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 C6orf229H3BNL8 230 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 SREBF2Q12772 1141 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 CFAP53Q96M91 514 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 EYA3Q99504 573 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
TMEM116-203ENST00000546537 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
TMEM116-203ENST00000546537 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
TMEM116-203ENST00000546537 COL4A1P02462 1669 aa14.31□□□□□ -0.12
TMEM116-203ENST00000546537 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
TMEM116-203ENST00000546537 GPSM2P81274 684 aa14.31□□□□□ -0.12
TMEM116-203ENST00000546537 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■□□□ 12.9
TMEM116-203ENST00000546537 PDIA6Q15084 440 aa14.31□□□□□ -0.12
TMEM116-203ENST00000546537 HSP90AB3PQ58FF7 597 aa14.31□□□□□ -0.12
TMEM116-203ENST00000546537 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
TMEM116-203ENST00000546537 TRMT112Q9UI30 125 aaKnown RBP14.31□□□□□ -0.12
TMEM116-203ENST00000546537 LAMB1P07942 1786 aa14.3□□□□□ -0.12
TMEM116-203ENST00000546537 OTOP1Q7RTM1 612 aa14.3□□□□□ -0.12
TMEM116-203ENST00000546537 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
TMEM116-203ENST00000546537 TBC1D16Q8TBP0 767 aa14.3□□□□□ -0.12
TMEM116-203ENST00000546537 TRIM17Q9Y577 477 aa14.3□□□□□ -0.12
TMEM116-203ENST00000546537 KIAA0100Q14667 2235 aaKnown RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 CNGB1Q14028 1251 aaPredicted RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 RSBN1LQ6PCB5 846 aaPredicted RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 NECTIN2Q92692 538 aa14.29□□□□□ -0.12
TMEM116-203ENST00000546537 ZC3H12CQ9C0D7 883 aaKnown RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 MYOZ2Q9NPC6 264 aa14.29□□□□□ -0.12
TMEM116-203ENST00000546537 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
TMEM116-203ENST00000546537 DLL1O00548 723 aa14.28□□□□□ -0.12
TMEM116-203ENST00000546537 ALDH1A1P00352 501 aa14.28□□□□□ -0.12
TMEM116-203ENST00000546537 EN2P19622 333 aaPredicted RBP14.28□□□□□ -0.12
TMEM116-203ENST00000546537 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
TMEM116-203ENST00000546537 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
TMEM116-203ENST00000546537 TTLL12Q14166 644 aaPredicted RBP14.27□□□□□ -0.13
TMEM116-203ENST00000546537 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.13
TMEM116-203ENST00000546537 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
TMEM116-203ENST00000546537 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.13
TMEM116-203ENST00000546537 GMLQ99445 158 aa14.27□□□□□ -0.13
TMEM116-203ENST00000546537 PTPN22Q9Y2R2 807 aa14.27□□□□□ -0.13
TMEM116-203ENST00000546537 ANXA1P04083 346 aa14.26□□□□□ -0.13
TMEM116-203ENST00000546537 USP17L8P0C7I0 530 aa14.26□□□□□ -0.13
TMEM116-203ENST00000546537 COPS6Q7L5N1 327 aa14.26□□□□□ -0.13
TMEM116-203ENST00000546537 ARMC5Q96C12 935 aa14.26□□□□□ -0.13
TMEM116-203ENST00000546537 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
TMEM116-203ENST00000546537 G3V3G9 751 aa14.25□□□□□ -0.13
TMEM116-203ENST00000546537 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
TMEM116-203ENST00000546537 NF2P35240 595 aa14.25□□□□□ -0.13
TMEM116-203ENST00000546537 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
TMEM116-203ENST00000546537 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
TMEM116-203ENST00000546537 OTUD5Q96G74 571 aa14.25□□□□□ -0.13
TMEM116-203ENST00000546537 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
TMEM116-203ENST00000546537 INHBEP58166 350 aa14.24□□□□□ -0.13
TMEM116-203ENST00000546537 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
TMEM116-203ENST00000546537 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
TMEM116-203ENST00000546537 SPRYD7Q5W111 196 aa14.24□□□□□ -0.13
TMEM116-203ENST00000546537 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
TMEM116-203ENST00000546537 TRIOBPQ9H2D6 2365 aa14.23□□□□□ -0.13
TMEM116-203ENST00000546537 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
TMEM116-203ENST00000546537 AIMP1Q12904 312 aaKnown RBP14.23□□□□□ -0.13
TMEM116-203ENST00000546537 LDLRAD1Q5T700 205 aa14.23□□□□□ -0.13
TMEM116-203ENST00000546537 ARMC9Q7Z3E5 817 aa14.23□□□□□ -0.13
TMEM116-203ENST00000546537 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
TMEM116-203ENST00000546537 ERO1AQ96HE7 468 aa14.23□□□□□ -0.13
TMEM116-203ENST00000546537 UFL1O94874 794 aa14.22□□□□□ -0.13
TMEM116-203ENST00000546537 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
TMEM116-203ENST00000546537 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
TMEM116-203ENST00000546537 FAM89AQ96GI7 184 aa14.22□□□□□ -0.13
TMEM116-203ENST00000546537 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 H0YGN5 161 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 WNT10BO00744 389 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 CD99L2Q8TCZ2 262 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 TMEM106CQ9BVX2 250 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 GGA1Q9UJY5 639 aa14.21□□□□□ -0.13
TMEM116-203ENST00000546537 IGF2BP3O00425 579 aaKnown RBP eCLIP14.2□□□□□ -0.14
TMEM116-203ENST00000546537 NEFMP07197 916 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 PRKG1Q13976 671 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 PODNQ7Z5L7 613 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 ZNF333Q96JL9 665 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 EFCC1Q9HA90 598 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 CEP290O15078 2479 aa14.2□□□□□ -0.14
TMEM116-203ENST00000546537 ZBTB48P10074 688 aaPredicted RBP14.19□□□□□ -0.14
TMEM116-203ENST00000546537 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
TMEM116-203ENST00000546537 PLEKHF1Q96S99 279 aa14.19□□□□□ -0.14
TMEM116-203ENST00000546537 ISCA1Q9BUE6 129 aa14.19□□□□□ -0.14
TMEM116-203ENST00000546537 ANGEL1Q9UNK9 670 aaKnown RBP14.19□□□□□ -0.14
TMEM116-203ENST00000546537 CAP1Q01518 475 aa14.18□□□□□ -0.14
TMEM116-203ENST00000546537 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
TMEM116-203ENST00000546537 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
TMEM116-203ENST00000546537 SP3Q02447 781 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 CRHR2Q13324 411 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 MAP3K11Q16584 847 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms