RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 MICALL2Q8IY33 904 aa24.04■■□□□ 1.44
CHPT1-202ENST00000546490 TRPM4Q8TD43 1214 aa24.04■■□□□ 1.44
CHPT1-202ENST00000546490 DPF2Q92785 391 aa24.04■■□□□ 1.44
CHPT1-202ENST00000546490 ZNF316A6NFI3 1004 aaPredicted RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 IGKV5-2P06315 115 aa24.03■■□□□ 1.44
CHPT1-202ENST00000546490 PAXIP1Q6ZW49 1069 aaPredicted RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 ANKRD18AQ8IVF6 992 aa24.03■■□□□ 1.44
CHPT1-202ENST00000546490 JARID2Q92833 1246 aaPredicted RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 CCDC85AQ96PX6 553 aaPredicted RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 ZC3H12CQ9C0D7 883 aaKnown RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 PGAP2Q9UHJ9 254 aa24.03■■□□□ 1.44
CHPT1-202ENST00000546490 GGA1Q9UJY5 639 aa24.03■■□□□ 1.44
CHPT1-202ENST00000546490 ZBTB12Q9Y330 459 aaPredicted RBP24.03■■□□□ 1.44
CHPT1-202ENST00000546490 FANCIQ9NVI1 1328 aa24.03■■□□□ 1.44
CHPT1-202ENST00000546490 POLR2AP24928 1970 aaKnown RBP24.02■■□□□ 1.44
CHPT1-202ENST00000546490 RPS12P25398 132 aaKnown RBP24.02■■□□□ 1.44
CHPT1-202ENST00000546490 ECE1P42892 770 aa24.02■■□□□ 1.44
CHPT1-202ENST00000546490 CTSWP56202 376 aa24.02■■□□□ 1.44
CHPT1-202ENST00000546490 DOK7Q18PE1 504 aa24.02■■□□□ 1.44
CHPT1-202ENST00000546490 GPR101Q96P66 508 aaPredicted RBP24.02■■□□□ 1.44
CHPT1-202ENST00000546490 GLIS2Q9BZE0 524 aaPredicted RBP24.02■■□□□ 1.44
CHPT1-202ENST00000546490 RTL9Q8NET4 1388 aa24.02■■□□□ 1.44
CHPT1-202ENST00000546490 CTCFP49711 727 aaPredicted RBP24.01■■□□□ 1.43
CHPT1-202ENST00000546490 HIRAP54198 1017 aaPredicted RBP24.01■■□□□ 1.43
CHPT1-202ENST00000546490 CST9Q5W186 159 aa24.01■■□□□ 1.43
CHPT1-202ENST00000546490 CDC5LQ99459 802 aaKnown RBP24.01■■□□□ 1.43
CHPT1-202ENST00000546490 TLL2Q9Y6L7 1015 aa24.01■■□□□ 1.43
CHPT1-202ENST00000546490 XDHP47989 1333 aa24.01■■□□□ 1.43
CHPT1-202ENST00000546490 SHTN1A0MZ66 631 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 G3V3G9 751 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 SLC4A2P04920 1241 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 DCAF8Q5TAQ9 597 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 CAPNS2Q96L46 248 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 WBP1LQ9NX94 342 aa24■■□□□ 1.43
CHPT1-202ENST00000546490 NEURL1BA8MQ27 555 aa23.99■■□□□ 1.43
CHPT1-202ENST00000546490 CELF2O95319 508 aaKnown RBP23.99■■□□□ 1.43
CHPT1-202ENST00000546490 MAP2K1Q02750 393 aaPredicted RBP23.99■■□□□ 1.43
CHPT1-202ENST00000546490 CWF19L2Q2TBE0 894 aaKnown RBP23.99■■□□□ 1.43
CHPT1-202ENST00000546490 CDC37L1Q7L3B6 337 aa23.99■■□□□ 1.43
CHPT1-202ENST00000546490 ZNF609O15014 1411 aa23.99■■□□□ 1.43
CHPT1-202ENST00000546490 FLIIQ13045 1269 aa23.98■■□□□ 1.43
CHPT1-202ENST00000546490 G2E3Q7L622 706 aa23.98■■□□□ 1.43
CHPT1-202ENST00000546490 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
CHPT1-202ENST00000546490 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
CHPT1-202ENST00000546490 GRM1Q13255 1194 aa23.97■■□□□ 1.43
CHPT1-202ENST00000546490 CYP4F22Q6NT55 531 aa23.97■■□□□ 1.43
CHPT1-202ENST00000546490 SAMD7Q7Z3H4 446 aa23.97■■□□□ 1.43
CHPT1-202ENST00000546490 WDR63Q8IWG1 891 aa23.97■■□□□ 1.43
CHPT1-202ENST00000546490 ZNF408Q9H9D4 720 aa23.97■■□□□ 1.43
CHPT1-202ENST00000546490 A0A1B0GUL6 1792 aa23.96■■□□□ 1.43
CHPT1-202ENST00000546490 CAPN15O75808 1086 aa23.96■■□□□ 1.43
CHPT1-202ENST00000546490 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
CHPT1-202ENST00000546490 TBC1D10BQ4KMP7 808 aaPredicted RBP23.96■■□□□ 1.43
CHPT1-202ENST00000546490 UBE3BQ7Z3V4 1068 aa23.96■■□□□ 1.43
CHPT1-202ENST00000546490 TTLL11Q8NHH1 800 aa23.96■■□□□ 1.43
CHPT1-202ENST00000546490 KCNQ5Q9NR82 932 aa23.96■■□□□ 1.43
CHPT1-202ENST00000546490 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
CHPT1-202ENST00000546490 ATP2B4P23634 1241 aa23.95■■□□□ 1.42
CHPT1-202ENST00000546490 SAPCD2Q86UD0 394 aa23.95■■□□□ 1.42
CHPT1-202ENST00000546490 MYH16Q9H6N6 1097 aa23.95■■□□□ 1.42
CHPT1-202ENST00000546490 GREM2Q9H772 168 aa23.95■■□□□ 1.42
CHPT1-202ENST00000546490 MED23Q9ULK4 1368 aa23.94■■□□□ 1.42
CHPT1-202ENST00000546490 VIL1P09327 827 aaKnown RBP23.94■■□□□ 1.42
CHPT1-202ENST00000546490 HHIPL1Q96JK4 782 aa23.94■■□□□ 1.42
CHPT1-202ENST00000546490 GCKRQ14397 625 aa23.93■■□□□ 1.42
CHPT1-202ENST00000546490 KIF4BQ2VIQ3 1234 aa23.93■■□□□ 1.42
CHPT1-202ENST00000546490 DNAAF4Q8WXU2 420 aa23.93■■□□□ 1.42
CHPT1-202ENST00000546490 BSDC1Q9NW68 430 aaPredicted RBP23.93■■□□□ 1.42
CHPT1-202ENST00000546490 H7C1W4 665 aa23.92■■□□□ 1.42
CHPT1-202ENST00000546490 EGFRP00533 1210 aa23.92■■□□□ 1.42
CHPT1-202ENST00000546490 BEGAINQ9BUH8 593 aa23.92■■□□□ 1.42
CHPT1-202ENST00000546490 HSPA8P11142 646 aaKnown RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 IGHMBP2P38935 993 aaKnown RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 LBX1P52954 281 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 EXOSC9Q06265 439 aaKnown RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 RBM26Q5T8P6 1007 aaKnown RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 RSBN1LQ6PCB5 846 aaPredicted RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 KRT26Q7Z3Y9 468 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 USP48Q86UV5 1035 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 AGBL3Q8NEM8 1001 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 LINS1Q8NG48 757 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 DCPSQ96C86 337 aaKnown RBP23.91■■□□□ 1.42
CHPT1-202ENST00000546490 PLA2G12BQ9BX93 195 aa23.91■■□□□ 1.42
CHPT1-202ENST00000546490 VAMP4O75379 141 aa23.9■■□□□ 1.42
CHPT1-202ENST00000546490 PODNQ7Z5L7 613 aa23.9■■□□□ 1.42
CHPT1-202ENST00000546490 MINPP1Q9UNW1 487 aa23.9■■□□□ 1.42
CHPT1-202ENST00000546490 MAP2K2P36507 400 aa23.89■■□□□ 1.41
CHPT1-202ENST00000546490 GGA3Q9NZ52 723 aa23.89■■□□□ 1.41
CHPT1-202ENST00000546490 CCT4P50991 539 aaKnown RBP23.88■■□□□ 1.41
CHPT1-202ENST00000546490 FAM161AQ3B820 660 aa23.88■■□□□ 1.41
CHPT1-202ENST00000546490 USP17L3A6NCW0 530 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 USP17L4A6NCW7 530 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 ADM5C9JUS6 153 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 AOC2O75106 756 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 ITGA6P23229 1130 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 CASP7P55210 303 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 USP17L1Q7RTZ2 530 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
CHPT1-202ENST00000546490 HUNKP57058 714 aa23.86■■□□□ 1.41
CHPT1-202ENST00000546490 ZNF280AP59817 542 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms