RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 VARSP26640 1264 aaKnown RBP9.51□□□□□ -0.89
CCDC60-205ENST00000546345 NME9Q86XW9 330 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 GPSM3Q9Y4H4 160 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 NRXN2Q9P2S2 1712 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 C9orf131Q5VYM1 1079 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 ARHGAP9Q9BRR9 750 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 FER1L6Q2WGJ9 1857 aa9.5□□□□□ -0.89
CCDC60-205ENST00000546345 TJP1Q07157 1748 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 GDF9O60383 454 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 ABL2P42684 1182 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 BCS1LQ9Y276 419 aa9.49□□□□□ -0.89
CCDC60-205ENST00000546345 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-205ENST00000546345 MAGEB6P1A0A0J9YX57 407 aa9.48□□□□□ -0.89
CCDC60-205ENST00000546345 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-205ENST00000546345 SMC1BQ8NDV3 1235 aa9.48□□□□□ -0.89
CCDC60-205ENST00000546345 ANKRD31Q8N7Z5 1873 aa9.48□□□□□ -0.89
CCDC60-205ENST00000546345 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
CCDC60-205ENST00000546345 ADAMTSL1Q8N6G6 1762 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 ZBBXA8MT70 800 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 FOXN1O15353 648 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 MMP10P09238 476 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 SSFA2P28290 1259 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PRR20EP86478 221 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PRR20CP86479 221 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PRR20DP86480 221 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PRR20BP86481 221 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PRR20AP86496 221 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 ARHGAP27Q6ZUM4 889 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 LINC00116Q8NCU8 138 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 POM121Q96HA1 1249 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 RRAGCQ9HB90 399 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 EVC2Q86UK5 1308 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 KDRP35968 1356 aa9.47□□□□□ -0.89
CCDC60-205ENST00000546345 LTBP1Q14766 1721 aa9.46□□□□□ -0.89
CCDC60-205ENST00000546345 ARFGEF2Q9Y6D5 1785 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 GPR37L1O60883 481 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 DPEP1P16444 411 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 KCNA3P22001 575 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC60-205ENST00000546345 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 ZCRB1Q8TBF4 217 aaKnown RBP9.46□□□□□ -0.9
CCDC60-205ENST00000546345 IP6K1Q92551 441 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
CCDC60-205ENST00000546345 SIAH2O43255 324 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 TGFB2P61812 414 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
CCDC60-205ENST00000546345 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
CCDC60-205ENST00000546345 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 NCAPD2Q15021 1401 aa9.45□□□□□ -0.9
CCDC60-205ENST00000546345 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
CCDC60-205ENST00000546345 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 NR1H3Q13133 447 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 IRF5Q13568 498 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 C1QTNF2Q9BXJ5 285 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 RNF181Q9P0P0 153 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
CCDC60-205ENST00000546345 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 SCN4AP35499 1836 aa9.44□□□□□ -0.9
CCDC60-205ENST00000546345 RTL1A6NKG5 1358 aa9.43□□□□□ -0.9
CCDC60-205ENST00000546345 GFRA3O60609 400 aa9.43□□□□□ -0.9
CCDC60-205ENST00000546345 ITPK1Q13572 414 aa9.43□□□□□ -0.9
CCDC60-205ENST00000546345 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
CCDC60-205ENST00000546345 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
CCDC60-205ENST00000546345 CNTNAP1P78357 1384 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 CYP27B1O15528 508 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 HOXC9P31274 260 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 MPNDQ8N594 471 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
CCDC60-205ENST00000546345 TOR4AQ9NXH8 423 aa9.42□□□□□ -0.9
CCDC60-205ENST00000546345 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 A6NJR5 290 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 POTECB2RU33 542 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 RASSF7Q02833 373 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 ARID5BQ14865 1188 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 LAPTM4AQ15012 233 aa9.41□□□□□ -0.9
CCDC60-205ENST00000546345 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms