RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 FER1L6Q2WGJ9 1857 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 SNED1Q8TER0 1413 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 TBC1D16Q8TBP0 767 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 EYA3Q99504 573 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 ANKRD2Q9GZV1 360 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 PODXL2Q9NZ53 605 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 POLLQ9UGP5 575 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 XDHP47989 1333 aa21.03■□□□□ 0.96
LTBR-215ENST00000546296 UFL1O94874 794 aa21.02■□□□□ 0.96
LTBR-215ENST00000546296 AOC3Q16853 763 aa21.02■□□□□ 0.96
LTBR-215ENST00000546296 WASHC4Q2M389 1173 aa21.02■□□□□ 0.96
LTBR-215ENST00000546296 ZNF526Q8TF50 670 aaPredicted RBP21.02■□□□□ 0.96
LTBR-215ENST00000546296 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
LTBR-215ENST00000546296 ATP2B4P23634 1241 aa21.01■□□□□ 0.95
LTBR-215ENST00000546296 PDE3AQ14432 1141 aa21.01■□□□□ 0.95
LTBR-215ENST00000546296 COG6Q9Y2V7 657 aa21.01■□□□□ 0.95
LTBR-215ENST00000546296 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
LTBR-215ENST00000546296 RIMBP2O15034 1052 aa21■□□□□ 0.95
LTBR-215ENST00000546296 KCNJ4P48050 445 aa21■□□□□ 0.95
LTBR-215ENST00000546296 CHRNDQ07001 517 aa21■□□□□ 0.95
LTBR-215ENST00000546296 MVPQ14764 893 aaKnown RBP21■□□□□ 0.95
LTBR-215ENST00000546296 NIM1KQ8IY84 436 aa21■□□□□ 0.95
LTBR-215ENST00000546296 ZC3H12CQ9C0D7 883 aaKnown RBP21■□□□□ 0.95
LTBR-215ENST00000546296 G3V3G9 751 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 KIAA2012Q0VF49 1180 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 DCAF8Q5TAQ9 597 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 DPY19L2Q6NUT2 758 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 HELBQ8NG08 1087 aaPredicted RBP20.99■□□□□ 0.95
LTBR-215ENST00000546296 KLHDC4Q8TBB5 520 aa20.99■□□□□ 0.95
LTBR-215ENST00000546296 GPR101Q96P66 508 aaPredicted RBP20.99■□□□□ 0.95
LTBR-215ENST00000546296 PUS3Q9BZE2 481 aaKnown RBP20.99■□□□□ 0.95
LTBR-215ENST00000546296 SRGAP3O43295 1099 aa20.98■□□□□ 0.95
LTBR-215ENST00000546296 ZNF784Q8NCA9 323 aaPredicted RBP20.98■□□□□ 0.95
LTBR-215ENST00000546296 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
LTBR-215ENST00000546296 DDX19BQ9UMR2 479 aa20.98■□□□□ 0.95
LTBR-215ENST00000546296 LEMD3Q9Y2U8 911 aa20.98■□□□□ 0.95
LTBR-215ENST00000546296 SBF1O95248 1867 aa20.97■□□□□ 0.95
LTBR-215ENST00000546296 TAF5LO75529 589 aa20.97■□□□□ 0.95
LTBR-215ENST00000546296 RRP1P56182 461 aaKnown RBP20.97■□□□□ 0.95
LTBR-215ENST00000546296 C1orf115Q9H7X2 142 aa20.97■□□□□ 0.95
LTBR-215ENST00000546296 LRRC37AA6NMS7 1700 aa20.97■□□□□ 0.95
LTBR-215ENST00000546296 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
LTBR-215ENST00000546296 RFX5P48382 616 aaPredicted RBP20.96■□□□□ 0.95
LTBR-215ENST00000546296 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
LTBR-215ENST00000546296 GPBP1L1Q9HC44 474 aaPredicted RBP20.96■□□□□ 0.95
LTBR-215ENST00000546296 ZNRF3Q9ULT6 936 aa20.96■□□□□ 0.95
LTBR-215ENST00000546296 ZNF804BA4D1E1 1349 aa20.96■□□□□ 0.95
LTBR-215ENST00000546296 MROH5Q6ZUA9 1318 aa20.96■□□□□ 0.95
LTBR-215ENST00000546296 GLTPD2A6NH11 291 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 WTIPA6NIX2 430 aaPredicted RBP20.95■□□□□ 0.94
LTBR-215ENST00000546296 FZD9O00144 591 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 PTPN12Q05209 780 aaKnown RBP20.95■□□□□ 0.94
LTBR-215ENST00000546296 DOK7Q18PE1 504 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 LRRC24Q50LG9 513 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 METTL24Q5JXM2 366 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 SIL1Q9H173 461 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 RIPOR2Q9Y4F9 1068 aa20.95■□□□□ 0.94
LTBR-215ENST00000546296 EYA2O00167 538 aa20.94■□□□□ 0.94
LTBR-215ENST00000546296 MTX1Q13505 466 aa20.94■□□□□ 0.94
LTBR-215ENST00000546296 SPEF2Q9C093 1822 aa20.93■□□□□ 0.94
LTBR-215ENST00000546296 CCDC88AQ3V6T2 1871 aa20.93■□□□□ 0.94
LTBR-215ENST00000546296 DBNDD1Q9H9R9 158 aa20.93■□□□□ 0.94
LTBR-215ENST00000546296 PA2G4Q9UQ80 394 aaKnown RBP20.93■□□□□ 0.94
LTBR-215ENST00000546296 GJA3Q9Y6H8 435 aa20.93■□□□□ 0.94
LTBR-215ENST00000546296 DUOX1Q9NRD9 1551 aa20.93■□□□□ 0.94
LTBR-215ENST00000546296 DDNO94850 711 aaPredicted RBP20.92■□□□□ 0.94
LTBR-215ENST00000546296 ATP8B2P98198 1209 aa20.92■□□□□ 0.94
LTBR-215ENST00000546296 COPRSQ9NQ92 184 aa20.92■□□□□ 0.94
LTBR-215ENST00000546296 ZNF541Q9H0D2 1346 aa20.92■□□□□ 0.94
LTBR-215ENST00000546296 PNMA6EA0A0J9YXQ4 647 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 SNAP23O00161 211 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 ECE2O60344 883 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 CIAO1O76071 339 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 ZBTB40Q9NUA8 1239 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 FBXO3Q9UK99 471 aa20.91■□□□□ 0.94
LTBR-215ENST00000546296 MED23Q9ULK4 1368 aa20.9■□□□□ 0.94
LTBR-215ENST00000546296 RAD17O75943 681 aa20.9■□□□□ 0.94
LTBR-215ENST00000546296 TNIP1Q15025 636 aa20.9■□□□□ 0.94
LTBR-215ENST00000546296 RRAGCQ9HB90 399 aa20.9■□□□□ 0.94
LTBR-215ENST00000546296 COL4A5P29400 1685 aa20.89■□□□□ 0.94
LTBR-215ENST00000546296 PDE8BO95263 885 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 IL15P40933 162 aaPredicted RBP20.89■□□□□ 0.93
LTBR-215ENST00000546296 CXCL9Q07325 125 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 UBE4AQ14139 1066 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 CIAPIN1Q6FI81 312 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 ATG9AQ7Z3C6 839 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 GPC2Q8N158 579 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 CEP126Q9P2H0 1117 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 LTBP1Q14766 1721 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 TIAM2Q8IVF5 1701 aa20.89■□□□□ 0.93
LTBR-215ENST00000546296 DICER1Q9UPY3 1922 aaKnown RBP20.88■□□□□ 0.93
LTBR-215ENST00000546296 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
LTBR-215ENST00000546296 KLRK1P26718 216 aa20.88■□□□□ 0.93
LTBR-215ENST00000546296 G3BP1Q13283 466 aaKnown RBP eCLIP20.88■□□□□ 0.93
LTBR-215ENST00000546296 CEP85Q6P2H3 762 aa20.88■□□□□ 0.93
LTBR-215ENST00000546296 TXNRD3Q86VQ6 643 aa20.88■□□□□ 0.93
LTBR-215ENST00000546296 COA1Q9GZY4 146 aa20.88■□□□□ 0.93
LTBR-215ENST00000546296 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms