RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 U2AF1Q01081 240 aaKnown RBP eCLIP23.48■■□□□ 1.35
C12orf43-209ENST00000546272 SCARF1Q14162 830 aa23.48■■□□□ 1.35
C12orf43-209ENST00000546272 DOK7Q18PE1 504 aa23.48■■□□□ 1.35
C12orf43-209ENST00000546272 EYA3Q99504 573 aa23.48■■□□□ 1.35
C12orf43-209ENST00000546272 SCN9AQ15858 1988 aa23.48■■□□□ 1.35
C12orf43-209ENST00000546272 SREBF2Q12772 1141 aa23.47■■□□□ 1.35
C12orf43-209ENST00000546272 MOB2Q70IA6 237 aa23.47■■□□□ 1.35
C12orf43-209ENST00000546272 POLLQ9UGP5 575 aa23.47■■□□□ 1.35
C12orf43-209ENST00000546272 PITPNM2Q9BZ72 1349 aa23.46■■□□□ 1.35
C12orf43-209ENST00000546272 UBE2Q2LH0YL09 131 aa23.46■■□□□ 1.35
C12orf43-209ENST00000546272 TRMT112Q9UI30 125 aaKnown RBP23.46■■□□□ 1.35
C12orf43-209ENST00000546272 HTTP42858 3142 aa23.46■■□□□ 1.35
C12orf43-209ENST00000546272 SH3TC1Q8TE82 1336 aa23.45■■□□□ 1.35
C12orf43-209ENST00000546272 ZNF280AP59817 542 aaPredicted RBP23.45■■□□□ 1.34
C12orf43-209ENST00000546272 HSP90AB3PQ58FF7 597 aa23.45■■□□□ 1.34
C12orf43-209ENST00000546272 NLRP10Q86W26 655 aa23.45■■□□□ 1.34
C12orf43-209ENST00000546272 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
C12orf43-209ENST00000546272 AGBL3Q8NEM8 1001 aa23.43■■□□□ 1.34
C12orf43-209ENST00000546272 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
C12orf43-209ENST00000546272 R3HDMLQ9H3Y0 253 aa23.43■■□□□ 1.34
C12orf43-209ENST00000546272 COLQQ9Y215 455 aaPredicted RBP23.43■■□□□ 1.34
C12orf43-209ENST00000546272 TRIM17Q9Y577 477 aa23.43■■□□□ 1.34
C12orf43-209ENST00000546272 ZNF609O15014 1411 aa23.43■■□□□ 1.34
C12orf43-209ENST00000546272 MYBBP1AQ9BQG0 1328 aaKnown RBP23.43■■□□□ 1.34
C12orf43-209ENST00000546272 DLG5Q8TDM6 1919 aa23.42■■□□□ 1.34
C12orf43-209ENST00000546272 GPSM2P81274 684 aa23.42■■□□□ 1.34
C12orf43-209ENST00000546272 NECTIN2Q92692 538 aa23.42■■□□□ 1.34
C12orf43-209ENST00000546272 MKRN3Q13064 507 aaKnown RBP23.41■■□□□ 1.34
C12orf43-209ENST00000546272 TTLL12Q14166 644 aaPredicted RBP23.41■■□□□ 1.34
C12orf43-209ENST00000546272 OTOP1Q7RTM1 612 aa23.41■■□□□ 1.34
C12orf43-209ENST00000546272 ZC3H12CQ9C0D7 883 aaKnown RBP23.41■■□□□ 1.34
C12orf43-209ENST00000546272 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
C12orf43-209ENST00000546272 TRIOBPQ9H2D6 2365 aa23.41■■□□□ 1.34
C12orf43-209ENST00000546272 CENPFP49454 3210 aa23.41■■□□□ 1.34
C12orf43-209ENST00000546272 ALDH1A1P00352 501 aa23.4■■□□□ 1.34
C12orf43-209ENST00000546272 PDIA6Q15084 440 aa23.4■■□□□ 1.34
C12orf43-209ENST00000546272 TBC1D16Q8TBP0 767 aa23.4■■□□□ 1.34
C12orf43-209ENST00000546272 CELF1Q92879 486 aaKnown RBP23.4■■□□□ 1.34
C12orf43-209ENST00000546272 CEP290O15078 2479 aa23.4■■□□□ 1.34
C12orf43-209ENST00000546272 G3V3G9 751 aa23.39■■□□□ 1.34
C12orf43-209ENST00000546272 DCAF8Q5TAQ9 597 aa23.39■■□□□ 1.34
C12orf43-209ENST00000546272 RSBN1LQ6PCB5 846 aaPredicted RBP23.39■■□□□ 1.34
C12orf43-209ENST00000546272 MYOZ2Q9NPC6 264 aa23.39■■□□□ 1.34
C12orf43-209ENST00000546272 PSME4Q14997 1843 aa23.39■■□□□ 1.33
C12orf43-209ENST00000546272 TCIRG1Q13488 830 aa23.38■■□□□ 1.33
C12orf43-209ENST00000546272 DLL1O00548 723 aa23.37■■□□□ 1.33
C12orf43-209ENST00000546272 USP17L8P0C7I0 530 aa23.37■■□□□ 1.33
C12orf43-209ENST00000546272 EN2P19622 333 aaPredicted RBP23.37■■□□□ 1.33
C12orf43-209ENST00000546272 NF2P35240 595 aa23.37■■□□□ 1.33
C12orf43-209ENST00000546272 SF3B3Q15393 1217 aaKnown RBP23.36■■□□□ 1.33
C12orf43-209ENST00000546272 PRAMEF18Q5VWM3 479 aa23.36■■□□□ 1.33
C12orf43-209ENST00000546272 SCAF8Q9UPN6 1271 aaKnown RBP23.36■■□□□ 1.33
C12orf43-209ENST00000546272 EIF2S2P20042 333 aaKnown RBP23.35■■□□□ 1.33
C12orf43-209ENST00000546272 PROSER3Q2NL68 480 aa23.35■■□□□ 1.33
C12orf43-209ENST00000546272 GMLQ99445 158 aa23.35■■□□□ 1.33
C12orf43-209ENST00000546272 PTPN22Q9Y2R2 807 aa23.35■■□□□ 1.33
C12orf43-209ENST00000546272 SZT2Q5T011 3432 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 ANXA1P04083 346 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 COPS6Q7L5N1 327 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 ARMC5Q96C12 935 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 PODXL2Q9NZ53 605 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 BRCA2P51587 3418 aa23.34■■□□□ 1.33
C12orf43-209ENST00000546272 NEFMP07197 916 aa23.33■■□□□ 1.33
C12orf43-209ENST00000546272 INHBEP58166 350 aa23.33■■□□□ 1.33
C12orf43-209ENST00000546272 AIMP1Q12904 312 aaKnown RBP23.33■■□□□ 1.33
C12orf43-209ENST00000546272 COL4A1P02462 1669 aa23.33■■□□□ 1.33
C12orf43-209ENST00000546272 PTPN12Q05209 780 aaKnown RBP23.33■■□□□ 1.32
C12orf43-209ENST00000546272 SPRYD7Q5W111 196 aa23.33■■□□□ 1.32
C12orf43-209ENST00000546272 ARMC9Q7Z3E5 817 aa23.33■■□□□ 1.32
C12orf43-209ENST00000546272 ERO1AQ96HE7 468 aa23.33■■□□□ 1.32
C12orf43-209ENST00000546272 UFL1O94874 794 aa23.32■■□□□ 1.32
C12orf43-209ENST00000546272 RPS8P62241 208 aaKnown RBP23.32■■□□□ 1.32
C12orf43-209ENST00000546272 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
C12orf43-209ENST00000546272 TMEM106CQ9BVX2 250 aa23.32■■□□□ 1.32
C12orf43-209ENST00000546272 MANSC4A6NHS7 340 aaPredicted RBP23.31■■□□□ 1.32
C12orf43-209ENST00000546272 NBPF9Q3BBW0 867 aa23.31■■□□□ 1.32
C12orf43-209ENST00000546272 IFNL1Q8IU54 200 aa23.31■■□□□ 1.32
C12orf43-209ENST00000546272 SLC17A8Q8NDX2 589 aa23.31■■□□□ 1.32
C12orf43-209ENST00000546272 FAM89AQ96GI7 184 aa23.3■■□□□ 1.32
C12orf43-209ENST00000546272 ANKIB1Q9P2G1 1089 aa23.3■■□□□ 1.32
C12orf43-209ENST00000546272 GGA1Q9UJY5 639 aa23.3■■□□□ 1.32
C12orf43-209ENST00000546272 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
C12orf43-209ENST00000546272 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
C12orf43-209ENST00000546272 OTUD5Q96G74 571 aa23.29■■□□□ 1.32
C12orf43-209ENST00000546272 USP17L3A6NCW0 530 aa23.28■■□□□ 1.32
C12orf43-209ENST00000546272 USP17L4A6NCW7 530 aa23.28■■□□□ 1.32
C12orf43-209ENST00000546272 USP17L1Q7RTZ2 530 aa23.28■■□□□ 1.32
C12orf43-209ENST00000546272 EFCC1Q9HA90 598 aa23.28■■□□□ 1.32
C12orf43-209ENST00000546272 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
C12orf43-209ENST00000546272 H0YGN5 161 aa23.27■■□□□ 1.32
C12orf43-209ENST00000546272 PRKG1Q13976 671 aa23.27■■□□□ 1.32
C12orf43-209ENST00000546272 CD99L2Q8TCZ2 262 aa23.27■■□□□ 1.32
C12orf43-209ENST00000546272 LAMB1P07942 1786 aa23.27■■□□□ 1.32
C12orf43-209ENST00000546272 PODNQ7Z5L7 613 aa23.26■■□□□ 1.31
C12orf43-209ENST00000546272 OGFOD1Q8N543 542 aa23.26■■□□□ 1.31
C12orf43-209ENST00000546272 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
C12orf43-209ENST00000546272 WNT10BO00744 389 aa23.25■■□□□ 1.31
C12orf43-209ENST00000546272 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
C12orf43-209ENST00000546272 ZNF333Q96JL9 665 aa23.25■■□□□ 1.31
C12orf43-209ENST00000546272 ANGEL1Q9UNK9 670 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms