RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 LSG1Q9H089 658 aaKnown RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 IFIT5Q13325 482 aaKnown RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 ARHGEF40Q8TER5 1519 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 MIGA1Q8NAN2 632 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 CWC25Q9NXE8 425 aaPredicted RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
TRAF1-203ENST00000546084 NEO1Q92859 1461 aa11.47□□□□□ -0.57
TRAF1-203ENST00000546084 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 TAF5LO75529 589 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 AKAP17AQ02040 695 aaKnown RBP11.46□□□□□ -0.57
TRAF1-203ENST00000546084 SKIDA1Q1XH10 827 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 IFT172Q9UG01 1749 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 NEURL1BA8MQ27 555 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 TNNI3KQ59H18 835 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 ORC3Q9UBD5 711 aaPredicted RBP11.46□□□□□ -0.57
TRAF1-203ENST00000546084 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 FPGT-TNNI3KV9GXZ4 949 aa11.46□□□□□ -0.57
TRAF1-203ENST00000546084 RGS12O14924 1447 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 NRDCO43847 1150 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 TDO2P48775 406 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 ANKRD1Q15327 319 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 C8orf76Q96K31 380 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 PAG1Q9NWQ8 432 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 LRP2BPQ9P2M1 347 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 PYCARDQ9ULZ3 195 aa11.46□□□□□ -0.58
TRAF1-203ENST00000546084 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 TYRO3Q06418 890 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 SH2B1Q9NRF2 756 aaPredicted RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 NRBP1Q9UHY1 535 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 AATKQ6ZMQ8 1374 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 DHX16O60231 1041 aaKnown RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 IPO4Q8TEX9 1081 aaKnown RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 CDK12Q9NYV4 1490 aaPredicted RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 IGKV5-2P06315 115 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 MCMDC2Q4G0Z9 681 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
TRAF1-203ENST00000546084 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
TRAF1-203ENST00000546084 PTPDC1A2A3K4 754 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 SERPINC1P01008 464 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 ADORA1P30542 326 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 CPLX3Q8WVH0 158 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 ZNF213O14771 459 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 NR1I2O75469 434 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 ZNF771Q7L3S4 317 aaPredicted RBP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 DNAJC10Q8IXB1 793 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 INCENPQ9NQS7 918 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 U2AF2P26368 475 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 IMMTQ16891 758 aaKnown RBP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 PHKBQ93100 1093 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 SLC52A2Q9HAB3 445 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 CPSF1Q10570 1443 aaKnown RBP11.44□□□□□ -0.58
TRAF1-203ENST00000546084 ATP7BP35670 1465 aa11.44□□□□□ -0.58
TRAF1-203ENST00000546084 TPM3P06753 285 aa11.43□□□□□ -0.58
TRAF1-203ENST00000546084 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
TRAF1-203ENST00000546084 SCAND2PQ9GZW5 306 aaPredicted RBP11.43□□□□□ -0.58
TRAF1-203ENST00000546084 MAP2P11137 1827 aaKnown RBP11.43□□□□□ -0.58
TRAF1-203ENST00000546084 METTL22Q9BUU2 404 aaPredicted RBP11.43□□□□□ -0.58
TRAF1-203ENST00000546084 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
TRAF1-203ENST00000546084 PRDM1O75626 825 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 RPS6KB1P23443 525 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 DHX8Q14562 1220 aaKnown RBP11.42□□□□□ -0.58
TRAF1-203ENST00000546084 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 AOPEPQ8N6M6 819 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 ARHGEF25Q86VW2 580 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
TRAF1-203ENST00000546084 CFAP45Q9UL16 551 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 CYP21A2P08686 494 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 TNNT1P13805 278 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 ZAP70P43403 619 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 TPM4P67936 248 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
TRAF1-203ENST00000546084 PIK3C2BO00750 1634 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 TTC41PQ6P2S7 1318 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 ERICH2A1L162 156 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
TRAF1-203ENST00000546084 KRT32Q14532 448 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 FAM182BQ5T319 152 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms