RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
GABRB3-205ENST00000545868 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
GABRB3-205ENST00000545868 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
GABRB3-205ENST00000545868 PPIP5K2O43314 1243 aa12.62□□□□□ -0.39
GABRB3-205ENST00000545868 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-205ENST00000545868 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
GABRB3-205ENST00000545868 RTFDC1Q9BY42 306 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-205ENST00000545868 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
GABRB3-205ENST00000545868 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
GABRB3-205ENST00000545868 TNRC18O15417 2968 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-205ENST00000545868 TRAF5O00463 557 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
GABRB3-205ENST00000545868 RALBP1Q15311 655 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-205ENST00000545868 PRDM10Q9NQV6 1147 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
GABRB3-205ENST00000545868 CHL1O00533 1208 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-205ENST00000545868 CXCL9Q07325 125 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 DEFB115Q30KQ5 88 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 CST9Q5W186 159 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
GABRB3-205ENST00000545868 ARIH1Q9Y4X5 557 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-205ENST00000545868 WDR33Q9C0J8 1336 aaKnown RBP12.6□□□□□ -0.39
GABRB3-205ENST00000545868 A0A1B0GUL6 1792 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 YDJCA8MPS7 323 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
GABRB3-205ENST00000545868 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-205ENST00000545868 LBX1P52954 281 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-205ENST00000545868 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
GABRB3-205ENST00000545868 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
GABRB3-205ENST00000545868 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
GABRB3-205ENST00000545868 PLCG2P16885 1265 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-205ENST00000545868 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 KIAA2012Q0VF49 1180 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 GRAPQ13588 217 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.4
GABRB3-205ENST00000545868 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-205ENST00000545868 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
GABRB3-205ENST00000545868 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
GABRB3-205ENST00000545868 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-205ENST00000545868 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
GABRB3-205ENST00000545868 CYP4F22Q6NT55 531 aa12.57□□□□□ -0.4
GABRB3-205ENST00000545868 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-205ENST00000545868 MPNDQ8N594 471 aa12.57□□□□□ -0.4
GABRB3-205ENST00000545868 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
GABRB3-205ENST00000545868 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
GABRB3-205ENST00000545868 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
GABRB3-205ENST00000545868 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
GABRB3-205ENST00000545868 SEMA3EO15041 775 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 BBOX1O75936 387 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 RAD17O75943 681 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 AIDAQ96BJ3 306 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 CAPNS2Q96L46 248 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 LAS1LQ9Y4W2 734 aaKnown RBP12.56□□□□□ -0.4
GABRB3-205ENST00000545868 TLL2Q9Y6L7 1015 aa12.56□□□□□ -0.4
GABRB3-205ENST00000545868 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
GABRB3-205ENST00000545868 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
GABRB3-205ENST00000545868 FAM89AQ96GI7 184 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 GLIS2Q9BZE0 524 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-205ENST00000545868 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
GABRB3-205ENST00000545868 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-205ENST00000545868 AOC2O75106 756 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 HOXB7P09629 217 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 DSG2Q14126 1118 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
GABRB3-205ENST00000545868 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-205ENST00000545868 EGFRP00533 1210 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-205ENST00000545868 GRM1Q13255 1194 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 SF3B3Q15393 1217 aaKnown RBP12.53□□□□□ -0.4
GABRB3-205ENST00000545868 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-205ENST00000545868 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 SAPCD2Q86UD0 394 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 TMC2Q8TDI7 906 aa12.53□□□□□ -0.4
GABRB3-205ENST00000545868 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms