RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 TACO1Q9BSH4 297 aaKnown RBP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 SRCIN1Q9C0H9 1055 aa7.87□□□□□ -1.15
NECAP1-208ENST00000545807 NUCKS1Q9H1E3 243 aaKnown RBP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 C9orf78Q9NZ63 289 aaPredicted RBP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 DBF4Q9UBU7 674 aaPredicted RBP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 ASAP1Q9ULH1 1129 aa7.87□□□□□ -1.15
NECAP1-208ENST00000545807 RRP15Q9Y3B9 282 aaKnown RBP7.87□□□□□ -1.15
NECAP1-208ENST00000545807 PNMA6EA0A0J9YXQ4 647 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 NRDCO43847 1150 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 UBTFL1P0CB47 393 aaPredicted RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 KCNQ4P56696 695 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 CCT2P78371 535 aaKnown RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 IRX1P78414 480 aaPredicted RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 UVSSAQ2YD98 709 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 CHD1LQ86WJ1 897 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 KIAA1524Q8TCG1 905 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 DNAAF4Q8WXU2 420 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 ANKRD18BA2A2Z9 1011 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 SMTNL1A8MU46 457 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 BAG4O95429 457 aaKnown RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 CCT4P50991 539 aaKnown RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 HDAC1Q13547 482 aaPredicted RBP7.86□□□□□ -1.15
NECAP1-208ENST00000545807 KMT5BQ4FZB7 885 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 CEP85Q6P2H3 762 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 KRBA2Q6ZNG9 492 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 FAXDC2Q96IV6 333 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 IL1RAPL2Q9NP60 686 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 TMOD3Q9NYL9 352 aa7.86□□□□□ -1.15
NECAP1-208ENST00000545807 CPDO75976 1380 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 EXOC5O00471 708 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 GNAI2P04899 355 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 NEFHP12036 1026 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 RBM5P52756 815 aaKnown RBP eCLIP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 JAKMIP3Q5VZ66 844 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 ERCC4Q92889 916 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 USP44Q9H0E7 712 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 RGS12O14924 1447 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 COL5A2P05997 1499 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 PAX7P23759 505 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 E2F4Q16254 413 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 FAM98CQ17RN3 349 aaKnown RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 CAVIN1Q6NZI2 390 aaKnown RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 MMS22LQ6ZRQ5 1243 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 CCDC191Q8NCU4 936 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 ARHGEF1Q92888 912 aaKnown RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 MYD88Q99836 296 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 PCDH11XQ9BZA7 1347 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 PCDH11YQ9BZA8 1340 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 TPM3P06753 285 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 C17orf53Q8N3J3 647 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-208ENST00000545807 C22orf23Q9BZE7 217 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 LMBRD1Q9NUN5 540 aa7.85□□□□□ -1.15
NECAP1-208ENST00000545807 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.15
NECAP1-208ENST00000545807 SNRPA1P09661 255 aaKnown RBP7.84□□□□□ -1.15
NECAP1-208ENST00000545807 FBXO18Q8NFZ0 1043 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
NECAP1-208ENST00000545807 ROBO1Q9Y6N7 1651 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 SRGAP3O43295 1099 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 SURF6O75683 361 aaKnown RBP7.84□□□□□ -1.15
NECAP1-208ENST00000545807 HSP90AB4PQ58FF6 505 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 MEX3CQ5U5Q3 659 aaKnown RBP7.84□□□□□ -1.15
NECAP1-208ENST00000545807 NEK11Q8NG66 645 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 PIGBQ92521 554 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 SIL1Q9H173 461 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 ETAA1Q9NY74 926 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 CHMP3Q9Y3E7 222 aa7.84□□□□□ -1.15
NECAP1-208ENST00000545807 FAM163BP0C2L3 166 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 NUCB1Q02818 461 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 TTLL7Q6ZT98 887 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ARMCX6Q7L4S7 300 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 PPP1R42Q7Z4L9 355 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 DNAJC10Q8IXB1 793 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ANKRD44Q8N8A2 993 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 GOLGA5Q8TBA6 731 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 KLHDC4Q8TBB5 520 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 PA2G4Q9UQ80 394 aaKnown RBP7.83□□□□□ -1.16
NECAP1-208ENST00000545807 MAP4K4O95819 1239 aaPredicted RBP7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ADRA2BP18089 450 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ERCC3P19447 782 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ADCY2Q08462 1091 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 SMIM5Q71RC9 77 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
NECAP1-208ENST00000545807 SMC3Q9UQE7 1217 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 GNAI3P08754 354 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 PDIA6Q15084 440 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 DDB1Q16531 1140 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 PPM1EQ8WY54 764 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 DDX21Q9NR30 783 aaKnown RBP eCLIP7.83□□□□□ -1.16
NECAP1-208ENST00000545807 ANAPC4Q9UJX5 808 aa7.83□□□□□ -1.16
NECAP1-208ENST00000545807 SSFA2P28290 1259 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 NUCB2P80303 420 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 TEX35Q5T0J7 233 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 BEND3Q5T5X7 828 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 KSR2Q6VAB6 950 aa7.82□□□□□ -1.16
NECAP1-208ENST00000545807 ANKRD13DQ6ZTN6 518 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms