RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL4A6-209ENST00000545689 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 ZKSCAN5Q9Y2L8 839 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 PRKCSHP14314 528 aaPredicted RBP14.37□□□□□ -0.11
COL4A6-209ENST00000545689 TRAF1Q13077 416 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 RTN1Q16799 776 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 PKNOX2Q96KN3 472 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
COL4A6-209ENST00000545689 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
COL4A6-209ENST00000545689 SRRTQ9BXP5 876 aaKnown RBP14.37□□□□□ -0.11
COL4A6-209ENST00000545689 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 RUFY3Q7L099 469 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 TUBB4BP68371 445 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 CKAP4Q07065 602 aaKnown RBP14.36□□□□□ -0.11
COL4A6-209ENST00000545689 IFI16Q16666 785 aaKnown RBP14.36□□□□□ -0.11
COL4A6-209ENST00000545689 BRAPQ7Z569 592 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 TAX1BP1Q86VP1 789 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 NOLC1Q14978 699 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL4A6-209ENST00000545689 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 TDRD12Q587J7 1177 aaKnown RBP14.36□□□□□ -0.11
COL4A6-209ENST00000545689 TSPYL6Q8N831 410 aa14.36□□□□□ -0.11
COL4A6-209ENST00000545689 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 UBASH3AP57075 661 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 KDM5AP29375 1690 aaKnown RBP14.35□□□□□ -0.11
COL4A6-209ENST00000545689 LMBR1LQ6UX01 489 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 GCOM1H8Y6P7 765 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-209ENST00000545689 MYZAPP0CAP1 466 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 AK2P54819 239 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-209ENST00000545689 TAOK3Q9H2K8 898 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 EXOC1Q9NV70 894 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 CPLX3Q8WVH0 158 aa14.35□□□□□ -0.11
COL4A6-209ENST00000545689 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 ANXA1P04083 346 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 DACT1Q9NYF0 836 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 FBLN1P23142 703 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 CCDC172P0C7W6 258 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 CBX1P83916 185 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
COL4A6-209ENST00000545689 DCAF5Q96JK2 942 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 PRC1O43663 620 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
COL4A6-209ENST00000545689 SLC4A4Q9Y6R1 1079 aa14.34□□□□□ -0.11
COL4A6-209ENST00000545689 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.11
COL4A6-209ENST00000545689 ERMNQ8TAM6 284 aa14.33□□□□□ -0.11
COL4A6-209ENST00000545689 CCDC91Q7Z6B0 441 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 TNNQ9UQP3 1299 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 N4BP3O15049 544 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 HOXC9P31274 260 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
COL4A6-209ENST00000545689 DHX32Q7L7V1 743 aaKnown RBP14.33□□□□□ -0.12
COL4A6-209ENST00000545689 IP6K1Q92551 441 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 ERICH4A6NGS2 130 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 SPTLC2O15270 562 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 SKILP12757 684 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 TYRO3Q06418 890 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 IL13P35225 146 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 EYA1Q99502 592 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
COL4A6-209ENST00000545689 TRIM47Q96LD4 638 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 CYP7A1P22680 504 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 GNG11P61952 73 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
COL4A6-209ENST00000545689 CALML3P27482 149 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 IFFO1Q0D2I5 559 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
COL4A6-209ENST00000545689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL4A6-209ENST00000545689 INCENPQ9NQS7 918 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 ANKRD62A6NC57 917 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 STAT6P42226 847 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
COL4A6-209ENST00000545689 ST5P78524 1137 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 CABP5Q9NP86 173 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 CCDC186Q7Z3E2 898 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
COL4A6-209ENST00000545689 SLC9C2Q5TAH2 1124 aa14.31□□□□□ -0.12
COL4A6-209ENST00000545689 KIAA0232Q92628 1395 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
COL4A6-209ENST00000545689 DDX21Q9NR30 783 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL4A6-209ENST00000545689 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
COL4A6-209ENST00000545689 AOPEPQ8N6M6 819 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 DYDC1Q8WWB3 177 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
COL4A6-209ENST00000545689 NYXQ9GZU5 481 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 PTPRTO14522 1441 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 IDEP14735 1019 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 PCDH11XQ9BZA7 1347 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms