RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MICAL2O94851 1124 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 TARSP26639 723 aaKnown RBP6.81□□□□□ -1.32
SNHG1-222ENST00000545308 WEE1P30291 646 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 TTC9Q92623 222 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 IFT43Q96FT9 208 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 PRIMPOLQ96LW4 560 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-222ENST00000545308 RARAP10276 462 aa6.8□□□□□ -1.32
SNHG1-222ENST00000545308 GPLD1P80108 840 aa6.8□□□□□ -1.32
SNHG1-222ENST00000545308 MYO19Q96H55 970 aa6.8□□□□□ -1.32
SNHG1-222ENST00000545308 SASH3O75995 380 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 MLLT1Q03111 559 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-222ENST00000545308 PLAURQ03405 335 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 LRP8Q14114 963 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 NBPF11Q86T75 865 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
SNHG1-222ENST00000545308 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-222ENST00000545308 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
SNHG1-222ENST00000545308 IGF2-ASQ6U949 168 aa6.78□□□□□ -1.32
SNHG1-222ENST00000545308 VTI1AQ96AJ9 217 aa6.78□□□□□ -1.32
SNHG1-222ENST00000545308 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
SNHG1-222ENST00000545308 OPLAHO14841 1288 aa6.77□□□□□ -1.33
SNHG1-222ENST00000545308 HYAL3O43820 417 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-222ENST00000545308 EGFRP00533 1210 aa6.77□□□□□ -1.33
SNHG1-222ENST00000545308 NOS3P29474 1203 aa6.77□□□□□ -1.33
SNHG1-222ENST00000545308 IREB2P48200 963 aaKnown RBP6.77□□□□□ -1.33
SNHG1-222ENST00000545308 NRLP54845 237 aa6.77□□□□□ -1.33
SNHG1-222ENST00000545308 SMG9Q9H0W8 520 aaKnown RBP6.77□□□□□ -1.33
SNHG1-222ENST00000545308 RTCBQ9Y3I0 505 aaKnown RBP6.77□□□□□ -1.33
SNHG1-222ENST00000545308 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-222ENST00000545308 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-222ENST00000545308 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
SNHG1-222ENST00000545308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNHG1-222ENST00000545308 TLR7Q9NYK1 1049 aaKnown RBP6.76□□□□□ -1.33
SNHG1-222ENST00000545308 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
SNHG1-222ENST00000545308 ECM1Q16610 540 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 MEGF10Q96KG7 1140 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-222ENST00000545308 SEPT3Q9UH03 358 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 EGFL7Q9UHF1 273 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 USP20Q9Y2K6 914 aa6.75□□□□□ -1.33
SNHG1-222ENST00000545308 DLL1O00548 723 aa6.74□□□□□ -1.33
SNHG1-222ENST00000545308 ICMTO60725 284 aa6.74□□□□□ -1.33
SNHG1-222ENST00000545308 XYLBO75191 536 aa6.74□□□□□ -1.33
SNHG1-222ENST00000545308 ABL1P00519 1130 aa6.74□□□□□ -1.33
SNHG1-222ENST00000545308 ERCC3P19447 782 aa6.74□□□□□ -1.33
SNHG1-222ENST00000545308 EIF2AK2P19525 551 aaKnown RBP6.74□□□□□ -1.33
SNHG1-222ENST00000545308 CMTR1Q8N1G2 835 aaKnown RBP6.74□□□□□ -1.33
SNHG1-222ENST00000545308 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-222ENST00000545308 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 H3BRB1 525 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 SIK1P57059 783 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 FKBP5Q13451 457 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-222ENST00000545308 TREML1Q86YW5 311 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 GTF3C2Q8WUA4 911 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-222ENST00000545308 PLD4Q96BZ4 506 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 MKNK1Q9BUB5 465 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
SNHG1-222ENST00000545308 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
SNHG1-222ENST00000545308 J3QW42 95 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 IGSF3O75054 1194 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 PSAPP07602 524 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 HOXD8P13378 290 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-222ENST00000545308 COX20Q5RI15 118 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 PRR23CQ6ZRP0 262 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 NPAS4Q8IUM7 802 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
SNHG1-222ENST00000545308 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 MMP20O60882 483 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 GHRHP01286 108 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-222ENST00000545308 SOX18P35713 384 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 DZIP1LQ8IYY4 767 aaKnown RBP6.71□□□□□ -1.34
SNHG1-222ENST00000545308 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
SNHG1-222ENST00000545308 AKTIPQ9H8T0 292 aa6.71□□□□□ -1.34
SNHG1-222ENST00000545308 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-222ENST00000545308 NSUN5Q96P11 429 aaKnown RBP6.7□□□□□ -1.34
SNHG1-222ENST00000545308 BCL2L13Q9BXK5 485 aa6.7□□□□□ -1.34
SNHG1-222ENST00000545308 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
SNHG1-222ENST00000545308 F8W735 103 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-222ENST00000545308 ALX3O95076 343 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 ARHGAP4P98171 946 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
SNHG1-222ENST00000545308 SLC51AQ86UW1 340 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 GLYCTKQ8IVS8 523 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 GIPC2Q8TF65 315 aa6.69□□□□□ -1.34
SNHG1-222ENST00000545308 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
SNHG1-222ENST00000545308 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms