RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 USP17L8P0C7I0 530 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 ARHGEF6Q15052 776 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 RSBN1LQ6PCB5 846 aaPredicted RBP9.65□□□□□ -0.86
COPA-207ENST00000545284 ARMC9Q7Z3E5 817 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 NLRP10Q86W26 655 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 MYOZ2Q9NPC6 264 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
COPA-207ENST00000545284 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
COPA-207ENST00000545284 MKI67P46013 3256 aaKnown RBP9.64□□□□□ -0.87
COPA-207ENST00000545284 RIMBP2O15034 1052 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
COPA-207ENST00000545284 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
COPA-207ENST00000545284 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 PODNQ7Z5L7 613 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 GMLQ99445 158 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
COPA-207ENST00000545284 G3V3G9 751 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 NEFMP07197 916 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 ZBTB48P10074 688 aaPredicted RBP9.63□□□□□ -0.87
COPA-207ENST00000545284 HSP90B1P14625 803 aaKnown RBP9.63□□□□□ -0.87
COPA-207ENST00000545284 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
COPA-207ENST00000545284 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
COPA-207ENST00000545284 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
COPA-207ENST00000545284 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
COPA-207ENST00000545284 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
COPA-207ENST00000545284 RPS8P62241 208 aaKnown RBP9.62□□□□□ -0.87
COPA-207ENST00000545284 GPSM2P81274 684 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
COPA-207ENST00000545284 TTLL12Q14166 644 aaPredicted RBP9.62□□□□□ -0.87
COPA-207ENST00000545284 PDIA6Q15084 440 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 IFNL1Q8IU54 200 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 R3HDMLQ9H3Y0 253 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 BABAM1Q9NWV8 329 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 DUOX1Q9NRD9 1551 aa9.62□□□□□ -0.87
COPA-207ENST00000545284 NUP98P52948 1817 aa9.61□□□□□ -0.87
COPA-207ENST00000545284 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
COPA-207ENST00000545284 MAP3K11Q16584 847 aa9.61□□□□□ -0.87
COPA-207ENST00000545284 MOB2Q70IA6 237 aa9.61□□□□□ -0.87
COPA-207ENST00000545284 CELF1Q92879 486 aaKnown RBP9.61□□□□□ -0.87
COPA-207ENST00000545284 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
COPA-207ENST00000545284 MYO3BQ8WXR4 1341 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 A0A1W2PPC1 479 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 SP3Q02447 781 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 SLC10A4Q96EP9 437 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 GGA1Q9UJY5 639 aa9.6□□□□□ -0.87
COPA-207ENST00000545284 H0YGN5 161 aa9.59□□□□□ -0.87
COPA-207ENST00000545284 WNT10BO00744 389 aa9.59□□□□□ -0.87
COPA-207ENST00000545284 TRIM28Q13263 835 aaKnown RBP9.59□□□□□ -0.87
COPA-207ENST00000545284 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
COPA-207ENST00000545284 APOBEC3FQ8IUX4 373 aaKnown RBP9.59□□□□□ -0.87
COPA-207ENST00000545284 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
COPA-207ENST00000545284 LAMB4A4D0S4 1761 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
COPA-207ENST00000545284 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
COPA-207ENST00000545284 UFL1O94874 794 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 GNRH1P01148 92 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 SLC9C1Q4G0N8 1177 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
COPA-207ENST00000545284 LRRC37AA6NMS7 1700 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 SZT2Q5T011 3432 aa9.58□□□□□ -0.88
COPA-207ENST00000545284 CAPN2P17655 700 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 ATP2B4P23634 1241 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
COPA-207ENST00000545284 SLC4A8Q2Y0W8 1093 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 STRIP1Q5VSL9 837 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 GPR153Q6NV75 609 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 XAGE3Q8WTP9 111 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
COPA-207ENST00000545284 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
COPA-207ENST00000545284 PPP2R3BQ9Y5P8 575 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
COPA-207ENST00000545284 HTTP42858 3142 aa9.57□□□□□ -0.88
COPA-207ENST00000545284 XDHP47989 1333 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 POLR2AP24928 1970 aaKnown RBP9.56□□□□□ -0.88
COPA-207ENST00000545284 COL1A1P02452 1464 aaPredicted RBP9.56□□□□□ -0.88
COPA-207ENST00000545284 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
COPA-207ENST00000545284 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
COPA-207ENST00000545284 PRMT2P55345 433 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 CRHR2Q13324 411 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms