RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 MYL6BP14649 208 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 AIMP1Q12904 312 aaKnown RBP8.68□□□□□ -1.02
SPPL3-209ENST00000545209 HSP90AB4PQ58FF6 505 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 GIGYF2Q6Y7W6 1299 aaKnown RBP8.68□□□□□ -1.02
SPPL3-209ENST00000545209 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 PARP9Q8IXQ6 854 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 NKX2-3Q8TAU0 364 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 XAGE3Q8WTP9 111 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 THRAP3Q9Y2W1 955 aaKnown RBP8.68□□□□□ -1.02
SPPL3-209ENST00000545209 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 APBB1O00213 710 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 EXOC5O00471 708 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 KDM4AO75164 1064 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 PDE4DQ08499 809 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 MORN1Q5T089 497 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 TNS2Q63HR2 1409 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 COPS6Q7L5N1 327 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 SSH3Q8TE77 659 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 TEX13AQ9BXU3 409 aaPredicted RBP8.67□□□□□ -1.02
SPPL3-209ENST00000545209 SHANK3Q9BYB0 1731 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 USP16Q9Y5T5 823 aa8.67□□□□□ -1.02
SPPL3-209ENST00000545209 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 PNMA6EA0A0J9YXQ4 647 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 NUTM2BA6NNL0 878 aaPredicted RBP8.66□□□□□ -1.02
SPPL3-209ENST00000545209 NUTM2EB1AL46 878 aaPredicted RBP8.66□□□□□ -1.02
SPPL3-209ENST00000545209 GRM8O00222 908 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 SRGAP3O43295 1099 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 CDC45O75419 566 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 TTC22Q5TAA0 569 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 PPP1R42Q7Z4L9 355 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
SPPL3-209ENST00000545209 TBC1D32Q96NH3 1257 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 METTL22Q9BUU2 404 aaPredicted RBP8.66□□□□□ -1.02
SPPL3-209ENST00000545209 EXOC6BQ9Y2D4 811 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
SPPL3-209ENST00000545209 LRP6O75581 1613 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 UTYO14607 1347 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 SPATA31A1Q5TZJ5 1347 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 SURF6O75683 361 aaKnown RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 NBPF7P0C2Y1 421 aaPredicted RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 USP46P62068 366 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 MTX1Q13505 466 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 BECN1Q14457 450 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 CWF19L2Q2TBE0 894 aaKnown RBP8.65□□□□□ -1.02
SPPL3-209ENST00000545209 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 BCL11AQ9H165 835 aa8.65□□□□□ -1.02
SPPL3-209ENST00000545209 GLI3P10071 1580 aa8.65□□□□□ -1.03
SPPL3-209ENST00000545209 JCADQ9P266 1359 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 AOX1Q06278 1338 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 NWD2Q9ULI1 1742 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 STARD3NLO95772 234 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 GCKRQ14397 625 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 ERC1Q8IUD2 1116 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 KIF1BPQ96EK5 621 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 MYD88Q99836 296 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 C22orf23Q9BZE7 217 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
SPPL3-209ENST00000545209 WNK3Q9BYP7 1800 aa8.64□□□□□ -1.03
SPPL3-209ENST00000545209 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 IGKV5-2P06315 115 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 MX1P20591 662 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 PDE1AP54750 535 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 DDB1Q16531 1140 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
SPPL3-209ENST00000545209 OTUD7AQ8TE49 926 aaPredicted RBP8.63□□□□□ -1.03
SPPL3-209ENST00000545209 PIGBQ92521 554 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 BCL9O00512 1426 aa8.63□□□□□ -1.03
SPPL3-209ENST00000545209 TLL1O43897 1013 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 GSPT1P15170 499 aaKnown RBP8.62□□□□□ -1.03
SPPL3-209ENST00000545209 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
SPPL3-209ENST00000545209 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
SPPL3-209ENST00000545209 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 SYTL4Q96C24 671 aaPredicted RBP8.62□□□□□ -1.03
SPPL3-209ENST00000545209 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 SUCLG2Q96I99 432 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 ASAP1Q9ULH1 1129 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms