RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 CAMK4Q16566 473 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 FAM173BQ6P4H8 233 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
SMAD7-202ENST00000545051 TCEANC2Q96MN5 208 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
SMAD7-202ENST00000545051 ANO6Q4KMQ2 910 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
SMAD7-202ENST00000545051 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.32
SMAD7-202ENST00000545051 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
SMAD7-202ENST00000545051 SPATA31A1Q5TZJ5 1347 aa17.02■□□□□ 0.31
SMAD7-202ENST00000545051 TAF5LO75529 589 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 AIMP1Q12904 312 aaKnown RBP17.01■□□□□ 0.31
SMAD7-202ENST00000545051 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
SMAD7-202ENST00000545051 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
SMAD7-202ENST00000545051 GLI3P10071 1580 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 PDIA6Q15084 440 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
SMAD7-202ENST00000545051 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 PTGS1P23219 599 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 STK3Q13188 491 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
SMAD7-202ENST00000545051 CAVIN2O95810 425 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 ATP5JP18859 108 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 BICD2Q8TD16 824 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 NEK1Q96PY6 1258 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 ARID3AQ99856 593 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 CARD10Q9BWT7 1032 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 NLRP2Q9NX02 1062 aa17■□□□□ 0.31
SMAD7-202ENST00000545051 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
SMAD7-202ENST00000545051 GCKRQ14397 625 aa16.99■□□□□ 0.31
SMAD7-202ENST00000545051 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
SMAD7-202ENST00000545051 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
SMAD7-202ENST00000545051 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
SMAD7-202ENST00000545051 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
SMAD7-202ENST00000545051 LAMA4Q16363 1823 aa16.99■□□□□ 0.31
SMAD7-202ENST00000545051 RESTQ13127 1097 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 JARID2Q92833 1246 aaPredicted RBP16.98■□□□□ 0.31
SMAD7-202ENST00000545051 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 ZNF75DP51815 510 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 KLHDC4Q8TBB5 520 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 TSC1Q92574 1164 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 ARFGEF2Q9Y6D5 1785 aa16.98■□□□□ 0.31
SMAD7-202ENST00000545051 RIOK3O14730 519 aaKnown RBP16.97■□□□□ 0.31
SMAD7-202ENST00000545051 BARGINQ6ZT62 677 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 BRF1Q92994 677 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
SMAD7-202ENST00000545051 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 COL15A1P39059 1388 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 ZNF609O15014 1411 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 A0A0G2JS52 829 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 H3BQV1 296 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 NR1I2O75469 434 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
SMAD7-202ENST00000545051 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
SMAD7-202ENST00000545051 JAK2O60674 1132 aa16.96■□□□□ 0.31
SMAD7-202ENST00000545051 ZNF165P49910 485 aa16.96■□□□□ 0.31
SMAD7-202ENST00000545051 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
SMAD7-202ENST00000545051 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
SMAD7-202ENST00000545051 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
SMAD7-202ENST00000545051 MYD88Q99836 296 aa16.96■□□□□ 0.31
SMAD7-202ENST00000545051 DBNLQ9UJU6 430 aaKnown RBP16.96■□□□□ 0.31
SMAD7-202ENST00000545051 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.3
SMAD7-202ENST00000545051 CDC25BP30305 580 aa16.96■□□□□ 0.3
SMAD7-202ENST00000545051 Q6ZUG5 572 aa16.96■□□□□ 0.3
SMAD7-202ENST00000545051 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.3
SMAD7-202ENST00000545051 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.3
SMAD7-202ENST00000545051 CDCA7Q9BWT1 371 aaPredicted RBP16.96■□□□□ 0.3
SMAD7-202ENST00000545051 CTIFO43310 598 aaKnown RBP16.95■□□□□ 0.3
SMAD7-202ENST00000545051 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
SMAD7-202ENST00000545051 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
SMAD7-202ENST00000545051 MYL6BP14649 208 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 DNAJC25Q9H1X3 360 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
SMAD7-202ENST00000545051 CTAGE5O15320 804 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 HMGB1P09429 215 aaKnown RBP16.94■□□□□ 0.3
SMAD7-202ENST00000545051 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
SMAD7-202ENST00000545051 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 ANKRD7Q92527 254 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 SLC52A2Q9HAB3 445 aa16.94■□□□□ 0.3
SMAD7-202ENST00000545051 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
SMAD7-202ENST00000545051 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
SMAD7-202ENST00000545051 CYP21A2P08686 494 aa16.93■□□□□ 0.3
SMAD7-202ENST00000545051 PTPN12Q05209 780 aaKnown RBP16.93■□□□□ 0.3
SMAD7-202ENST00000545051 TFCP2Q12800 502 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms