RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 STYK1Q6J9G0 422 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-224ENST00000544990 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
CPSF7-224ENST00000544990 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 IBTKQ9P2D0 1353 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-224ENST00000544990 CACNA1SQ13698 1873 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 NPR1P16066 1061 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 ALDH1B1P30837 517 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 TWISTNBQ3B726 338 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-224ENST00000544990 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 UTP14AQ9BVJ6 771 aaKnown RBP9.47□□□□□ -0.89
CPSF7-224ENST00000544990 MYH16Q9H6N6 1097 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
CPSF7-224ENST00000544990 CACNA1FO60840 1977 aa9.46□□□□□ -0.89
CPSF7-224ENST00000544990 COL11A2P13942 1736 aaPredicted RBP9.46□□□□□ -0.89
CPSF7-224ENST00000544990 KLRG2A4D1S0 409 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-224ENST00000544990 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.9
CPSF7-224ENST00000544990 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 SOGA3Q5TF21 947 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 DIEXFQ68CQ4 756 aaKnown RBP9.46□□□□□ -0.9
CPSF7-224ENST00000544990 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 TSPYL6Q8N831 410 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 LHX6Q9UPM6 363 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 RNF123Q5XPI4 1314 aa9.46□□□□□ -0.9
CPSF7-224ENST00000544990 C21orf2O43822 256 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 NTSR2O95665 410 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 CLCN1P35523 988 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
CPSF7-224ENST00000544990 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 PHAXQ9H814 394 aaKnown RBP9.45□□□□□ -0.9
CPSF7-224ENST00000544990 TRMT112Q9UI30 125 aaKnown RBP9.45□□□□□ -0.9
CPSF7-224ENST00000544990 FANCIQ9NVI1 1328 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 ARFGEF2Q9Y6D5 1785 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 SBF1O95248 1867 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
CPSF7-224ENST00000544990 EXOSC9Q06265 439 aaKnown RBP9.44□□□□□ -0.9
CPSF7-224ENST00000544990 SLC10A5Q5PT55 438 aa9.44□□□□□ -0.9
CPSF7-224ENST00000544990 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
CPSF7-224ENST00000544990 PRPF40BQ6NWY9 871 aaKnown RBP9.44□□□□□ -0.9
CPSF7-224ENST00000544990 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
CPSF7-224ENST00000544990 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
CPSF7-224ENST00000544990 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
CPSF7-224ENST00000544990 RIC1Q4ADV7 1423 aa9.44□□□□□ -0.9
CPSF7-224ENST00000544990 UTRNP46939 3433 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 ADCY9O60503 1353 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 ABCC12Q96J65 1359 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 ATP5J2-PTCD1G3V325 749 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 VAMP4O75379 141 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 LMNB1P20700 586 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 TRIM28Q13263 835 aaKnown RBP9.43□□□□□ -0.9
CPSF7-224ENST00000544990 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 PADI6Q6TGC4 694 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 ISCA1Q9BUE6 129 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 FAM117AQ9C073 453 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-224ENST00000544990 RNF181Q9P0P0 153 aa9.43□□□□□ -0.9
CPSF7-224ENST00000544990 FER1L6Q2WGJ9 1857 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 E9PSI1 815 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 PTPREP23469 700 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 PRSS12P56730 875 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 NEXNQ0ZGT2 675 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 KSR2Q6VAB6 950 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 CCDC191Q8NCU4 936 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 MYD88Q99836 296 aa9.42□□□□□ -0.9
CPSF7-224ENST00000544990 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
CPSF7-224ENST00000544990 GOLGB1Q14789 3259 aaKnown RBP9.41□□□□□ -0.9
CPSF7-224ENST00000544990 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 PI4KAP2A4QPH2 592 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 NFKBIEO00221 500 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 HCLS1P14317 486 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-224ENST00000544990 RASSF7Q02833 373 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 PI4KAP1Q8N8J0 262 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
CPSF7-224ENST00000544990 ZNF526Q8TF50 670 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-224ENST00000544990 C7orf43Q8WVR3 580 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 MAP3K2Q9Y2U5 619 aa9.41□□□□□ -0.9
CPSF7-224ENST00000544990 DICER1Q9UPY3 1922 aaKnown RBP9.41□□□□□ -0.9
CPSF7-224ENST00000544990 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
CPSF7-224ENST00000544990 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
CPSF7-224ENST00000544990 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms