RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 EPHX2P34913 555 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 CIAPIN1Q6FI81 312 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 TBC1D16Q8TBP0 767 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 MPHOSPH8Q99549 860 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 TAF1P21675 1872 aa14.93□□□□□ -0.02
HDAC4-216ENST00000544989 ANKRD18BA2A2Z9 1011 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 G3V3G9 751 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 UFL1O94874 794 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 SLC34A2O95436 690 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 ITGA6P23229 1130 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 BRPF1P55201 1214 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-216ENST00000544989 CXCL9Q07325 125 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
HDAC4-216ENST00000544989 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 SLC51AQ86UW1 340 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 ANKRD2Q9GZV1 360 aa14.92□□□□□ -0.02
HDAC4-216ENST00000544989 COL4A5P29400 1685 aa14.91□□□□□ -0.02
HDAC4-216ENST00000544989 DUOX1Q9NRD9 1551 aa14.91□□□□□ -0.02
HDAC4-216ENST00000544989 CAPN15O75808 1086 aa14.9□□□□□ -0.02
HDAC4-216ENST00000544989 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
HDAC4-216ENST00000544989 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
HDAC4-216ENST00000544989 EAPPQ56P03 285 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-216ENST00000544989 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-216ENST00000544989 MINPP1Q9UNW1 487 aa14.9□□□□□ -0.02
HDAC4-216ENST00000544989 LEMD3Q9Y2U8 911 aa14.9□□□□□ -0.02
HDAC4-216ENST00000544989 UTYO14607 1347 aa14.9□□□□□ -0.02
HDAC4-216ENST00000544989 RIMBP2O15034 1052 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 ECE2O60344 883 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 SCNN1DP51172 638 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 FOXO4P98177 505 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 CCDC57Q2TAC2 916 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 BCL2L13Q9BXK5 485 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 API5Q9BZZ5 524 aaKnown RBP14.89□□□□□ -0.03
HDAC4-216ENST00000544989 ADARB2Q9NS39 739 aaKnown RBP14.89□□□□□ -0.03
HDAC4-216ENST00000544989 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 HDAC5Q9UQL6 1122 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 KIF16BQ96L93 1317 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
HDAC4-216ENST00000544989 RAD17O75943 681 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
HDAC4-216ENST00000544989 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
HDAC4-216ENST00000544989 CCT4P50991 539 aaKnown RBP14.88□□□□□ -0.03
HDAC4-216ENST00000544989 HNRNPUQ00839 825 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-216ENST00000544989 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 LMBR1LQ6UX01 489 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 DPF2Q92785 391 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 DBNDD1Q9H9R9 158 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
HDAC4-216ENST00000544989 MED23Q9ULK4 1368 aa14.87□□□□□ -0.03
HDAC4-216ENST00000544989 YDJCA8MPS7 323 aa14.87□□□□□ -0.03
HDAC4-216ENST00000544989 GMPSP49915 693 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-216ENST00000544989 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
HDAC4-216ENST00000544989 COL4A1P02462 1669 aa14.87□□□□□ -0.03
HDAC4-216ENST00000544989 H7C1D1 291 aa14.86□□□□□ -0.03
HDAC4-216ENST00000544989 PSMD14O00487 310 aa14.86□□□□□ -0.03
HDAC4-216ENST00000544989 IPO8O15397 1037 aaKnown RBP14.86□□□□□ -0.03
HDAC4-216ENST00000544989 EPS15P42566 896 aa14.86□□□□□ -0.03
HDAC4-216ENST00000544989 KCNJ4P48050 445 aa14.86□□□□□ -0.03
HDAC4-216ENST00000544989 RARSP54136 660 aaKnown RBP14.86□□□□□ -0.03
HDAC4-216ENST00000544989 DOK7Q18PE1 504 aa14.85□□□□□ -0.03
HDAC4-216ENST00000544989 ZC3H15Q8WU90 426 aaKnown RBP14.85□□□□□ -0.03
HDAC4-216ENST00000544989 COA1Q9GZY4 146 aa14.85□□□□□ -0.03
HDAC4-216ENST00000544989 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
HDAC4-216ENST00000544989 ZNF804BA4D1E1 1349 aa14.85□□□□□ -0.03
HDAC4-216ENST00000544989 VIL1P09327 827 aaKnown RBP14.84□□□□□ -0.03
HDAC4-216ENST00000544989 NBPF7P0C2Y1 421 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-216ENST00000544989 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 MMP14P50281 582 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 CHRNDQ07001 517 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 LDHAL6AQ6ZMR3 332 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 AGBL3Q8NEM8 1001 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 SUCLG2Q96I99 432 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 CNOT7Q9UIV1 285 aaKnown RBP14.84□□□□□ -0.03
HDAC4-216ENST00000544989 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
HDAC4-216ENST00000544989 ZNF609O15014 1411 aa14.83□□□□□ -0.03
HDAC4-216ENST00000544989 RABL6Q3YEC7 729 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-216ENST00000544989 EPHA10Q5JZY3 1008 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 GPR101Q96P66 508 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-216ENST00000544989 USP44Q9H0E7 712 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 CNNM1Q9NRU3 951 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 PASKQ96RG2 1323 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 ADAMTSL1Q8N6G6 1762 aa14.83□□□□□ -0.04
HDAC4-216ENST00000544989 USP17L3A6NCW0 530 aa14.82□□□□□ -0.04
HDAC4-216ENST00000544989 USP17L4A6NCW7 530 aa14.82□□□□□ -0.04
HDAC4-216ENST00000544989 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-216ENST00000544989 C15orf52Q6ZUT6 534 aaKnown RBP14.82□□□□□ -0.04
HDAC4-216ENST00000544989 USP17L1Q7RTZ2 530 aa14.82□□□□□ -0.04
HDAC4-216ENST00000544989 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
HDAC4-216ENST00000544989 MYO3BQ8WXR4 1341 aa14.82□□□□□ -0.04
HDAC4-216ENST00000544989 UBTFL1P0CB47 393 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-216ENST00000544989 MAP1SQ66K74 1059 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms