RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 ZNF589Q86UQ0 364 aaPredicted RBP21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 CDHR2Q9BYE9 1310 aa21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 PDCP20941 246 aa21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 LRRFIP1Q32MZ4 808 aaKnown RBP21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 FAM182BQ5T319 152 aa21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 PIGBQ92521 554 aa21.53■■□□□ 1.04
TNFAIP1-202ENST00000544907 BCL9O00512 1426 aa21.52■■□□□ 1.04
TNFAIP1-202ENST00000544907 F13A1P00488 732 aa21.52■■□□□ 1.04
TNFAIP1-202ENST00000544907 AKAP2Q9Y2D5 859 aa21.52■■□□□ 1.04
TNFAIP1-202ENST00000544907 CSF1RP07333 972 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 ME3Q16798 604 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 ZBTB38Q8NAP3 1195 aaPredicted RBP21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 ARXQ96QS3 562 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 DSCC1Q9BVC3 393 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 TMEM63CQ9P1W3 806 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 DOT1LQ8TEK3 1739 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 MAP3K15Q6ZN16 1313 aa21.51■■□□□ 1.03
TNFAIP1-202ENST00000544907 GJB2P29033 226 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 PAG1Q9NWQ8 432 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 LARGE1O95461 756 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 CPA1P15085 419 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 GIGYF2Q6Y7W6 1299 aaKnown RBP21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 CCDC83Q8IWF9 413 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 TPCN1Q9ULQ1 816 aa21.5■■□□□ 1.03
TNFAIP1-202ENST00000544907 FAM196AQ6ZSG2 479 aa21.49■■□□□ 1.03
TNFAIP1-202ENST00000544907 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
TNFAIP1-202ENST00000544907 CEP126Q9P2H0 1117 aa21.49■■□□□ 1.03
TNFAIP1-202ENST00000544907 MTMR6Q9Y217 621 aa21.49■■□□□ 1.03
TNFAIP1-202ENST00000544907 EP400Q96L91 3159 aa21.49■■□□□ 1.03
TNFAIP1-202ENST00000544907 LETM1O95202 739 aaPredicted RBP21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 ST3GAL1Q11201 340 aa21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 ZMYM1Q5SVZ6 1142 aa21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 FOXD4L5Q5VV16 416 aaPredicted RBP21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 FOXD4L4Q8WXT5 416 aaPredicted RBP21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 EDC3Q96F86 508 aaKnown RBP21.48■■□□□ 1.03
TNFAIP1-202ENST00000544907 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 UBE2HP62256 183 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 HS1BP3Q53T59 392 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 DNAJC10Q8IXB1 793 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 NEK1Q96PY6 1258 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 RTN4Q9NQC3 1192 aaKnown RBP21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 PRIM1P49642 420 aaKnown RBP21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 TOB2Q14106 344 aaPredicted RBP21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 TRIM44Q96DX7 344 aaPredicted RBP21.47■■□□□ 1.03
TNFAIP1-202ENST00000544907 KAT6BQ8WYB5 2073 aa21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 ERVV-1B6SEH8 477 aa21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 ZFYP08048 801 aaPredicted RBP21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 CHMP4CQ96CF2 233 aa21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 NHSQ6T4R5 1651 aa21.46■■□□□ 1.03
TNFAIP1-202ENST00000544907 IFIT1P09914 478 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-202ENST00000544907 CLCN1P35523 988 aa21.45■■□□□ 1.02
TNFAIP1-202ENST00000544907 LRRC24Q50LG9 513 aa21.45■■□□□ 1.02
TNFAIP1-202ENST00000544907 DDX46Q7L014 1031 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-202ENST00000544907 ITGB4P16144 1822 aa21.45■■□□□ 1.02
TNFAIP1-202ENST00000544907 CYP19A1P11511 503 aaPredicted RBP21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 TIMM10P62072 90 aa21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 RNF113AO15541 343 aaKnown RBP21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 CHAMP1Q96JM3 812 aa21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 ZNF512BQ96KM6 892 aaPredicted RBP21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 AK7Q96M32 723 aa21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 RBSNQ9H1K0 784 aa21.44■■□□□ 1.02
TNFAIP1-202ENST00000544907 GOLIM4O00461 696 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 CYP21A2P08686 494 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 IFIT5Q13325 482 aaKnown RBP21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 FBXL16Q8N461 479 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 FAM184AQ8NB25 1140 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 PDLIM2Q96JY6 352 aa21.43■■□□□ 1.02
TNFAIP1-202ENST00000544907 SYCE3A1L190 88 aa21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 CCDC183Q5T5S1 534 aa21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 LARP1BQ659C4 914 aaKnown RBP21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 NLRP10Q86W26 655 aa21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 LARP6Q9BRS8 491 aaKnown RBP21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 LLPHQ9BRT6 129 aaKnown RBP21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 AGXT2Q9BYV1 514 aa21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 RRAGDQ9NQL2 400 aaPredicted RBP21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 ELP1O95163 1332 aa21.42■■□□□ 1.02
TNFAIP1-202ENST00000544907 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
TNFAIP1-202ENST00000544907 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
TNFAIP1-202ENST00000544907 ESPNB1AK53 854 aa21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 DHX32Q7L7V1 743 aaKnown RBP21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 ZNF594Q96JF6 807 aaPredicted RBP21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 CNPY2Q9Y2B0 182 aa21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 NECAB1Q8N987 351 aa21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 PUS3Q9BZE2 481 aaKnown RBP21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 TSPY26PQ9H489 355 aa21.4■■□□□ 1.02
TNFAIP1-202ENST00000544907 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms