RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 MTX1Q13505 466 aa11.83□□□□□ -0.52
CDK2AP1-206ENST00000544658 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
CDK2AP1-206ENST00000544658 SYT17Q9BSW7 474 aa11.83□□□□□ -0.52
CDK2AP1-206ENST00000544658 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
CDK2AP1-206ENST00000544658 CD2APQ9Y5K6 639 aa11.83□□□□□ -0.52
CDK2AP1-206ENST00000544658 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 PDE6BP35913 854 aa11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 ZNF622Q969S3 477 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK2AP1-206ENST00000544658 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 H0YIN7 160 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 SNAP23O00161 211 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 NPR1P16066 1061 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
CDK2AP1-206ENST00000544658 TGFB2P61812 414 aa11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 ASTLQ6HA08 431 aaPredicted RBP11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 STYK1Q6J9G0 422 aa11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 SIL1Q9H173 461 aa11.8□□□□□ -0.52
CDK2AP1-206ENST00000544658 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 GRAPQ13588 217 aa11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 HELBQ8NG08 1087 aaPredicted RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 RIPOR2Q9Y4F9 1068 aa11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 LRRC37AA6NMS7 1700 aa11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 UTRNP46939 3433 aa11.79□□□□□ -0.52
CDK2AP1-206ENST00000544658 SNED1Q8TER0 1413 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 LTBP1Q14766 1721 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 SASH1O94885 1247 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 GPR101Q96P66 508 aaPredicted RBP11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 COPRSQ9NQ92 184 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
CDK2AP1-206ENST00000544658 DUOX1Q9NRD9 1551 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 C21orf2O43822 256 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 TAF5LO75529 589 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 PRELPP51888 382 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 GPSM2P81274 684 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 SKAP1Q86WV1 359 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.53
CDK2AP1-206ENST00000544658 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 EYA2O00167 538 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 PPEF1O14829 653 aaPredicted RBP11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 KLRK1P26718 216 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 VGLL2Q8N8G2 317 aa11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
CDK2AP1-206ENST00000544658 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 APBB1O00213 710 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 BBOX1O75936 387 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 CHRNDQ07001 517 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 TFCP2Q12800 502 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 DCTPP1Q9H773 170 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 BSDC1Q9NW68 430 aaPredicted RBP11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 ATP6V0A2Q9Y487 856 aa11.75□□□□□ -0.53
CDK2AP1-206ENST00000544658 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 NEFLP07196 543 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 TAF7LQ5H9L4 462 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 COL4A5P29400 1685 aa11.74□□□□□ -0.53
CDK2AP1-206ENST00000544658 NFKBIEO00221 500 aa11.73□□□□□ -0.53
CDK2AP1-206ENST00000544658 CHD4Q14839 1912 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms