RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 EYA3Q99504 573 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 ANKRD2Q9GZV1 360 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
LTBR-213ENST00000544454 FZD9O00144 591 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 RLBP1P12271 317 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 AOC3Q16853 763 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
LTBR-213ENST00000544454 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
LTBR-213ENST00000544454 SBF1O95248 1867 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 TAF1P21675 1872 aa17.16■□□□□ 0.34
LTBR-213ENST00000544454 UFL1O94874 794 aa17.15■□□□□ 0.34
LTBR-213ENST00000544454 GNAI2P04899 355 aa17.15■□□□□ 0.34
LTBR-213ENST00000544454 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
LTBR-213ENST00000544454 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.15■□□□□ 0.34
LTBR-213ENST00000544454 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
LTBR-213ENST00000544454 ZC3H12CQ9C0D7 883 aaKnown RBP17.15■□□□□ 0.34
LTBR-213ENST00000544454 LEMD3Q9Y2U8 911 aa17.15■□□□□ 0.34
LTBR-213ENST00000544454 MYH3P11055 1940 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 LRRC37AA6NMS7 1700 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 ZBTB7BO15156 539 aaPredicted RBP17.14■□□□□ 0.33
LTBR-213ENST00000544454 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
LTBR-213ENST00000544454 CNNM1Q9NRU3 951 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
LTBR-213ENST00000544454 PLIN1O60240 522 aa17.13■□□□□ 0.33
LTBR-213ENST00000544454 CHRNDQ07001 517 aa17.13■□□□□ 0.33
LTBR-213ENST00000544454 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
LTBR-213ENST00000544454 RIMBP2O15034 1052 aa17.12■□□□□ 0.33
LTBR-213ENST00000544454 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
LTBR-213ENST00000544454 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
LTBR-213ENST00000544454 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
LTBR-213ENST00000544454 MTX1Q13505 466 aa17.11■□□□□ 0.33
LTBR-213ENST00000544454 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
LTBR-213ENST00000544454 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
LTBR-213ENST00000544454 DDNO94850 711 aaPredicted RBP17.1■□□□□ 0.33
LTBR-213ENST00000544454 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
LTBR-213ENST00000544454 GPC2Q8N158 579 aa17.1■□□□□ 0.33
LTBR-213ENST00000544454 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
LTBR-213ENST00000544454 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
LTBR-213ENST00000544454 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
LTBR-213ENST00000544454 MROH5Q6ZUA9 1318 aa17.1■□□□□ 0.33
LTBR-213ENST00000544454 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
LTBR-213ENST00000544454 G3V3G9 751 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 TAF5LO75529 589 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 KCNJ4P48050 445 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
LTBR-213ENST00000544454 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
LTBR-213ENST00000544454 KLHDC4Q8TBB5 520 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
LTBR-213ENST00000544454 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 NMRK2Q9NPI5 230 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 COL4A5P29400 1685 aa17.09■□□□□ 0.33
LTBR-213ENST00000544454 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.33
LTBR-213ENST00000544454 LTBP1Q14766 1721 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 EYA2O00167 538 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.32
LTBR-213ENST00000544454 CXCL9Q07325 125 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 TNIP1Q15025 636 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 DOK7Q18PE1 504 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 C15orf52Q6ZUT6 534 aaKnown RBP17.08■□□□□ 0.32
LTBR-213ENST00000544454 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
LTBR-213ENST00000544454 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 DDX19BQ9UMR2 479 aa17.08■□□□□ 0.32
LTBR-213ENST00000544454 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 ECE2O60344 883 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 CIAO1O76071 339 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 UBE4AQ14139 1066 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 PODNQ7Z5L7 613 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
LTBR-213ENST00000544454 POTECB2RU33 542 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 KIF3CO14782 793 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 RAD17O75943 681 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 PDE8BO95263 885 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
LTBR-213ENST00000544454 TIAM2Q8IVF5 1701 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 SNAP23O00161 211 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
LTBR-213ENST00000544454 ATG9AQ7Z3C6 839 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
LTBR-213ENST00000544454 IRS2Q9Y4H2 1338 aa17.04■□□□□ 0.32
LTBR-213ENST00000544454 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
LTBR-213ENST00000544454 SIL1Q9H173 461 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms