RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 FIBPO43427 364 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 IL15P40933 162 aaPredicted RBP14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 NEUROD6Q96NK8 337 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 NDUFB9Q9Y6M9 179 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 TNS2Q63HR2 1409 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 VGLL3A8MV65 326 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 LETM1O95202 739 aaPredicted RBP14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 PDCP20941 246 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 LARP1BQ659C4 914 aaKnown RBP14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 DDX46Q7L014 1031 aaKnown RBP14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 ATG9AQ7Z3C6 839 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 KBTBD3Q8NAB2 608 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 TAF6LQ9Y6J9 622 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 TCEANC2Q96MN5 208 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 EVA1CP58658 441 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 TOB2Q14106 344 aaPredicted RBP14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 RNF214Q8ND24 703 aa14.55□□□□□ -0.08
LRTOMT-221ENST00000544409 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 COL9A3Q14050 684 aaPredicted RBP14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 SH3TC1Q8TE82 1336 aa14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 PALLDQ8WX93 1383 aa14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 GTPBP4Q9BZE4 634 aaKnown RBP14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 EYA2O00167 538 aa14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 NEK1Q96PY6 1258 aa14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
LRTOMT-221ENST00000544409 DTNBO60941 627 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 KIF20AO95235 890 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 ATP2B3Q16720 1220 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 TICAM2Q86XR7 235 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 TMEM51Q9NW97 253 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 PAG1Q9NWQ8 432 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 CIAO1O76071 339 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 MPNDQ8N594 471 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
LRTOMT-221ENST00000544409 GOLIM4O00461 696 aa14.52□□□□□ -0.08
LRTOMT-221ENST00000544409 FAM184AQ8NB25 1140 aa14.52□□□□□ -0.08
LRTOMT-221ENST00000544409 HELLSQ9NRZ9 838 aa14.52□□□□□ -0.08
LRTOMT-221ENST00000544409 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.09
LRTOMT-221ENST00000544409 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.09
LRTOMT-221ENST00000544409 ZNF710Q8N1W2 664 aa14.52□□□□□ -0.09
LRTOMT-221ENST00000544409 CHGBP05060 677 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 TIMM10P62072 90 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 ZNF594Q96JF6 807 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 ISCA1Q9BUE6 129 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 STRCQ7RTU9 1775 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 KRT85P78386 507 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 STK3Q13188 491 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 SPEF2Q9C093 1822 aa14.51□□□□□ -0.09
LRTOMT-221ENST00000544409 ZBTB22O15209 634 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 CYP21A2P08686 494 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 TCIRG1Q13488 830 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 CDC37L1Q7L3B6 337 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 PTMAP06454 111 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 IFIT1P09914 478 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 UVSSAQ2YD98 709 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 TEX13AQ9BXU3 409 aaPredicted RBP14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 Q6ZUG5 572 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 MYRIPQ8NFW9 859 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 CCDC39Q9UFE4 941 aa14.5□□□□□ -0.09
LRTOMT-221ENST00000544409 MCM5P33992 734 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 KIF6Q6ZMV9 814 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 GTF3C6Q969F1 213 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 DSCC1Q9BVC3 393 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 CEP126Q9P2H0 1117 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 ZNF330Q9Y3S2 320 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 ZNF335Q9H4Z2 1342 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 HMGB1P09429 215 aaKnown RBP14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 ZMYM1Q5SVZ6 1142 aa14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.49□□□□□ -0.09
LRTOMT-221ENST00000544409 LAMA4Q16363 1823 aa14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 FERMT3Q86UX7 667 aa14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 PUS3Q9BZE2 481 aaKnown RBP14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 CGNQ9P2M7 1197 aaKnown RBP14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 ELP1O95163 1332 aa14.48□□□□□ -0.09
LRTOMT-221ENST00000544409 NHSL1Q5SYE7 1610 aa14.47□□□□□ -0.09
LRTOMT-221ENST00000544409 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
LRTOMT-221ENST00000544409 AKAP2Q9Y2D5 859 aa14.47□□□□□ -0.09
LRTOMT-221ENST00000544409 PCCAP05165 728 aaPredicted RBP14.47□□□□□ -0.09
LRTOMT-221ENST00000544409 DNAJC10Q8IXB1 793 aa14.47□□□□□ -0.09
LRTOMT-221ENST00000544409 STARD3NLO95772 234 aa14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 KIAA2012Q0VF49 1180 aa14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 LRRFIP1Q32MZ4 808 aaKnown RBP14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 CCDC158Q5M9N0 1113 aa14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 TTC6Q86TZ1 520 aa14.46□□□□□ -0.09
LRTOMT-221ENST00000544409 SCAND2PQ9GZW5 306 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms