RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 RABL6Q3YEC7 729 aaPredicted RBP17.93■□□□□ 0.46
CHFR-223ENST00000544268 RREB1Q92766 1687 aa17.93■□□□□ 0.46
CHFR-223ENST00000544268 GADD45BO75293 160 aaPredicted RBP17.93■□□□□ 0.46
CHFR-223ENST00000544268 AK2P54819 239 aa17.93■□□□□ 0.46
CHFR-223ENST00000544268 TRIM28Q13263 835 aaKnown RBP17.93■□□□□ 0.46
CHFR-223ENST00000544268 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
CHFR-223ENST00000544268 EAF2Q96CJ1 260 aaPredicted RBP17.93■□□□□ 0.46
CHFR-223ENST00000544268 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
CHFR-223ENST00000544268 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
CHFR-223ENST00000544268 GPTP24298 496 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 RUFY3Q7L099 469 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
CHFR-223ENST00000544268 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 ARID3AQ99856 593 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 GTPBP4Q9BZE4 634 aaKnown RBP17.92■□□□□ 0.46
CHFR-223ENST00000544268 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 CHGBP05060 677 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 FOXO4P98177 505 aa17.92■□□□□ 0.46
CHFR-223ENST00000544268 EDC3Q96F86 508 aaKnown RBP17.92■□□□□ 0.46
CHFR-223ENST00000544268 ZNF831Q5JPB2 1677 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 NUP98P52948 1817 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 ERVV-1B6SEH8 477 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 IFIT2P09913 472 aaKnown RBP17.91■□□□□ 0.46
CHFR-223ENST00000544268 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
CHFR-223ENST00000544268 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 TTC14Q96N46 770 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
CHFR-223ENST00000544268 KIF20AO95235 890 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
CHFR-223ENST00000544268 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
CHFR-223ENST00000544268 DIAPH3Q9NSV4 1193 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 ECHDC1Q9NTX5 307 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
CHFR-223ENST00000544268 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
CHFR-223ENST00000544268 RFX5P48382 616 aaPredicted RBP17.9■□□□□ 0.46
CHFR-223ENST00000544268 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 NLRP10Q86W26 655 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 BOLA2Q9H3K6 86 aa17.9■□□□□ 0.46
CHFR-223ENST00000544268 MCM2P49736 904 aa17.89■□□□□ 0.45
CHFR-223ENST00000544268 RNF214Q8ND24 703 aa17.89■□□□□ 0.45
CHFR-223ENST00000544268 CCDC39Q9UFE4 941 aa17.89■□□□□ 0.45
CHFR-223ENST00000544268 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
CHFR-223ENST00000544268 ZFP91Q96JP5 570 aaPredicted RBP17.89■□□□□ 0.45
CHFR-223ENST00000544268 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
CHFR-223ENST00000544268 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
CHFR-223ENST00000544268 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
CHFR-223ENST00000544268 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
CHFR-223ENST00000544268 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHFR-223ENST00000544268 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
CHFR-223ENST00000544268 IL17RAQ96F46 866 aa17.88■□□□□ 0.45
CHFR-223ENST00000544268 CHMP3Q9Y3E7 222 aa17.88■□□□□ 0.45
CHFR-223ENST00000544268 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
CHFR-223ENST00000544268 PCCAP05165 728 aaPredicted RBP17.88■□□□□ 0.45
CHFR-223ENST00000544268 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
CHFR-223ENST00000544268 INTS4Q96HW7 963 aaKnown RBP17.88■□□□□ 0.45
CHFR-223ENST00000544268 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 ERC1Q8IUD2 1116 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 JAKMIP1Q96N16 626 aaKnown RBP17.87■□□□□ 0.45
CHFR-223ENST00000544268 COPRSQ9NQ92 184 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
CHFR-223ENST00000544268 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
CHFR-223ENST00000544268 TCHHQ07283 1943 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 A0A0D9SFI3 127 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 NMIQ13287 307 aaPredicted RBP17.86■□□□□ 0.45
CHFR-223ENST00000544268 USP48Q86UV5 1035 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 MYRIPQ8NFW9 859 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 CNTNAP4Q9C0A0 1308 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 CCDC83Q8IWF9 413 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
CHFR-223ENST00000544268 LETM1O95202 739 aaPredicted RBP17.85■□□□□ 0.45
CHFR-223ENST00000544268 ST3GAL1Q11201 340 aa17.85■□□□□ 0.45
CHFR-223ENST00000544268 TMEM51Q9NW97 253 aa17.85■□□□□ 0.45
CHFR-223ENST00000544268 LY75O60449 1722 aa17.85■□□□□ 0.45
CHFR-223ENST00000544268 RBM6P78332 1123 aaKnown RBP17.84■□□□□ 0.45
CHFR-223ENST00000544268 ZNF830Q96NB3 372 aaPredicted RBP17.84■□□□□ 0.45
CHFR-223ENST00000544268 FAM196AQ6ZSG2 479 aa17.84■□□□□ 0.45
CHFR-223ENST00000544268 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
CHFR-223ENST00000544268 SYT1P21579 422 aa17.83■□□□□ 0.45
CHFR-223ENST00000544268 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.45
CHFR-223ENST00000544268 CHRM1P11229 460 aaPredicted RBP17.83■□□□□ 0.44
CHFR-223ENST00000544268 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.44
CHFR-223ENST00000544268 RBM8AQ9Y5S9 174 aaKnown RBP17.83■□□□□ 0.44
CHFR-223ENST00000544268 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
CHFR-223ENST00000544268 RC3H1Q5TC82 1133 aaKnown RBP17.82■□□□□ 0.44
CHFR-223ENST00000544268 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
CHFR-223ENST00000544268 LIMCH1Q9UPQ0 1083 aa17.82■□□□□ 0.44
CHFR-223ENST00000544268 SLFNL1Q499Z3 407 aa17.82■□□□□ 0.44
CHFR-223ENST00000544268 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
CHFR-223ENST00000544268 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 TRIM37O94972 964 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
CHFR-223ENST00000544268 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms